Evidence map›Paper›PMID 22753893›Full record

ArticleThe Journal of cell biology2012

Bnip3 and AIF cooperate to induce apoptosis and cavitation during epithelial morphogenesis.

Yanmei Qi, Xiaoxiang Tian, Jie Liu, Yaling Han, Alan M Graham, M Celeste Simon, Josef M Penninger, Peter Carmeliet, Shaohua Li

Erratum issuedOpen access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
2.0field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 35 citations in OpenAlex.

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  15. Poly(ADP-ribose) polymerase-1 causes mitochondrial damage and neuron death mediated by Bnip3.The Journal of neuroscience : the official journal of the Society for Neuroscience · 2014
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  16. Review
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4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 4 institutions in 4 countries.

Yanmei QiDepartment of Surgery, University of Medicine and Dentistry New Jersey Robert Wood Johnson Medical School, New Brunswick, NJ 08093, USA.
Xiaoxiang Tian
Jie Liu
Yaling Han
Alan M Graham
M Celeste Simon
Josef M Penninger
Peter Carmeliet
Shaohua Li
Cancer Research Institute · USInstitute of Molecular Biotechnology · ATKU Leuven · BEShenyang 242 Hospital · CN

Funding

Regulation of embryonic epithelial morphogenesisR01GM081674 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI LI, SHAOHUA · 2008 to 2011
$1.3M
NIGMS NIH HHS R01 GM081674NIGMS NIH HHS R01GM081674
6 · The paper itself

Abstract

Apoptosis is an essential step in cavitation during embryonic epithelial morphogenesis, but its mechanisms are largely unknown. In this paper, we used embryonic stem cell-differentiated embryoid bodies (EBs) as a model and found that Bnip3 (Bcl-2/adenovirus E1B 19-kD interacting protein), a BH3-only proapoptotic protein, was highly up-regulated during cavitation in a hypoxia-dependent manner. Short hairpin RNA silencing of Bnip3 inhibited apoptosis of the core cells and delayed cavitation. We show that the Bnip3 up-regulation was mediated mainly by hypoxia-inducible factor (HIF)-2. Ablation of HIF-2α or HIF-1β, the common β subunit of HIF-1 and -2, suppressed Bnip3 up-regulation and inhibited apoptosis and cavitation. We further show that apoptosis-inducing factor (AIF) cooperated with Bnip3 to promote lumen clearance. Bnip3 silencing in AIF-null EBs nearly blocked apoptosis and cavitation. Moreover, AIF also regulated Bnip3 expression through mitochondrial production of reactive oxygen species and consequent HIF-2α stabilization. These results uncover a mechanism of cavitation through hypoxia-induced apoptosis of the core cells mediated by HIFs, Bnip3, and AIF.

Indexed as

ApoptosisAnimalsApoptosis Inducing FactorAryl Hydrocarbon Receptor Nuclear TranslocatorBasic Helix-Loop-Helix ProteinsCells, CulturedEmbryonic Stem CellsEndothelial PAS Domain-Containing Protein 1Epithelial CellsGene SilencingMembrane ProteinsMiceMitochondriaMitochondrial ProteinsMorphogenesisReactive Oxygen SpeciesApoptosis Inducing FactorArnt protein, mouseAryl Hydrocarbon Receptor Nuclear TranslocatorBasic Helix-Loop-Helix ProteinsBNip3 protein, mouseEndothelial PAS Domain-Containing Protein 1Membrane ProteinsMitochondrial ProteinsReactive Oxygen SpeciesRNA, Small Interfering

Identifiers

PMID22753893
PMCPMC3392936
OpenAlexW2133529309

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.