Evidence map›Paper›PMID 22752728›Full record

ArticleMolecular biology reports2012

Subcellular localization of different regions of porcine Six1 gene and its expression analysis in C2C12 myoblasts.

Wangjun Wu, Zhuqing Ren, Chao Chen, Yang Liu, Lin Zhang, Zhe Chao, Bo Zuo, Dequan Xu, Minggang Lei, Yuanzhu Xiong

Abstract read
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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.5field-weighted citation impact, top 34% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

  1. Article
  2. Modeling the transport of nuclear proteins along single skeletal muscle cells.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  3. Article
  4. LncRNA-Six1 Encodes a Micropeptide to ActivateFrontiers in physiology · 2017
    Article
  5. Overexpression of sineoculis homeobox homolog 1 predicts poor prognosis of hepatocellular carcinoma.International journal of clinical and experimental pathology · 2014
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 2 institutions in 1 country.

Wangjun WuDepartment of Animal Genetics, Breeding and Reproduction, College of Animal Science and Technology, Nanjing Agricultural University, Nanjing 210095, China. wuwangjun2009@hotmail.com
Zhuqing Ren
Chao Chen
Yang Liu
Lin Zhang
Zhe Chao
Bo Zuo
Dequan Xu
Minggang Lei
Yuanzhu Xiong
Huazhong Agricultural University · CNNanjing Agricultural University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Six1 protein belongs to the Six homeoproteins family, exposing typical domain structure. Although the functions of Six1 have been drawn much attention, the roles of its individual domains are not completely elucidated. Here, we first detected the expression patterns of myogenin, MyoD, Myf5, and Six1 genes using real-time PCR in differentiating C2C12 cells cultured in differentiation medium for 2 or 6 days. The results showed that Six1 gene had the similar expression pattern with myogenin, MyoD, and Myf5 genes, which suggests that it may affect the myogenic differentiation. In order to evaluate the role of distinct domains of Six1 protein in subcellular localization, we constructed a series of truncated vectors tagged with green fluorescent proteins expressing various regions of porcine Six1 protein for subcellular localization analysis. Fluorescence confocal microscopy analysis showed that the different regions of Six1 protein displayed discrete distributions throughout the nucleus and the cytoplasm. The full-length CDS was exclusively localized in the nucleus and the individual HD domain was preferentially distributed to the nucleus both in C2C12 cells and in PK cells. However, the SD domain was diffusely distributed to the cytoplasm and the nucleus, and the localization of SD domain was biased to cytoplasm in C2C12 cells. Taken together, we conclude that the HD domain is important for the nuclear localization of porcine Six1 protein.

Indexed as

Gene ExpressionAmino Acid SequenceAnimalsCell LineCell NucleusHomeodomain ProteinsMiceModels, BiologicalMyoblastsMyoD ProteinMyogenic Regulatory Factor 5MyogeninPeptide FragmentsProtein Structure, TertiaryProtein TransportRecombinant ProteinsHomeodomain ProteinsMyoD ProteinMyogenic Regulatory Factor 5MyogeninPeptide FragmentsRecombinant Proteins

Identifiers

PMID22752728
OpenAlexW2089520201

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.