Evidence map›Paper›PMID 22750986›Full record

ArticleJournal of biosciences2012

Inhibition of HIV-1 Integrase gene expression by 10-23 DNAzyme.

Nirpendra Singh, Atul Ranjan, Souvik Sur, Ramesh Chandra, Vibha Tandon

Abstract read
PubMed Publisher
In one paragraph

Article in Journal of biosciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 24 citations in OpenAlex.

  1. Unraveling the Kinetics of the 10-23 RNA-Cleaving DNAzyme.International journal of molecular sciences · 2023
    Article
  2. Construction and Application of DNAzyme-based Nanodevices.Chemical research in Chinese universities · 2023
    Review
  3. Article
  4. Article
  5. Article
  6. Theranostic DNAzymes.Theranostics · 2017
    Review
  7. Article
  8. Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Nirpendra SinghDr BR Ambedkar Center for Biomedical Research, University of Delhi, New Delhi 110 007, India.
Atul Ranjan
Souvik Sur
Ramesh Chandra
Vibha Tandon
University of Delhi · IN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

HIV Integrase (IN) is an enzyme that is responsible for the integration of the proviral genome into the human genome, and this integration step is the first step of the virus hijacking the human cell machinery for its propagation and replication. 10-23 DNAzyme has the potential to suppress gene expressions through sequence-specific mRNA cleavage. We have designed three novel DNAzymes, DIN54, DIN116, and DIN152, against HIV-1 Integrase gene using Mfold software and evaluated them for target site cleavage activity on the in vitro transcribed mRNA. All DNAzymes were tested for its inhibition of expression of HIV Integrase protein in the transiently transfected cell lines. DIN116 and DIN152 inhibited IN-EGFP expression by 80 percent and 70 percent respectively.

Indexed as

Gene ExpressionBase PairingBase SequenceDNA, CatalyticDNA, Single-StrandedGreen Fluorescent ProteinsHeLa CellsHIV IntegraseHumansModels, MolecularNucleic Acid ConformationRecombinant Fusion ProteinsRNA CleavageRNA, MessengerSoftwareDNA, CatalyticDNA, Single-Strandedenhanced green fluorescent proteinGreen Fluorescent ProteinsHIV Integrasep31 integrase protein, Human immunodeficiency virus 1Recombinant Fusion ProteinsRNA-cleaving DNA 10-23RNA, Messenger

Identifiers

PMID22750986
OpenAlexW1964053517

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.