Evidence map›Paper›PMID 22750088›Full record

ReviewJournal of biotechnology2013

Systems biological approaches towards understanding cellulase production by Trichoderma reesei.

Christian P Kubicek

Abstract readReview
In one paragraph

Review in Journal of biotechnology, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 51 papers.

0numbers the graph read from it
0cells of the map it votes in
51citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

51 citing papers in PubMed.

  1. Journal of fungi (Basel, Switzerland) · 2026
    Article
  2. Journal of fungi (Basel, Switzerland) · 2025
    Article
  3. Cellulase Production by Ultraviolet-Derived MutantInternational journal of molecular sciences · 2025
    Article
  4. Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Review
  11. Article
  12. Article
  13. Understanding the Role ofJournal of fungi (Basel, Switzerland) · 2021
    Article
  14. Global Reprogramming of Gene Transcription inFrontiers in bioengineering and biotechnology · 2020
    Article
  15. Deletion of either the regulatory geneBiotechnology for biofuels · 2019
    Article
  16. Article
  17. Applications of Microbial Enzymes in Food Industry.Food technology and biotechnology · 2018
    Review
  18. Improving the thermal stability of cellobiohydrolase Cel7A fromThe Journal of biological chemistry · 2017
    Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Christian P KubicekAustrian Institute of Industrial Biotechnology, Vienna, Austria. ckubicek@mail.zserv.tuwien.ac.at

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Recent progress and improvement in "-omics" technologies has made it possible to study the physiology of organisms by integrated and genome-wide approaches. This bears the advantage that the global response, rather than isolated pathways and circuits within an organism, can be investigated ("systems biology"). The sequencing of the genome of Trichoderma reesei (teleomorph Hypocrea jecorina), a fungus that serves as a major producer of biomass-degrading enzymes for the use of renewable lignocellulosic material towards production of biofuels and biorefineries, has offered the possibility to study this organism and its enzyme production on a genome wide scale. In this review, I will highlight the use of genomics, transcriptomics, proteomics and metabolomics towards an improved and novel understanding of the biochemical processes that involve in the massive overproduction of secreted proteins.

Indexed as

CellulaseDNA, FungalGenome, FungalGenomicsSystems BiologyTrichodermaCellulaseDNA, Fungal

Identifiers

PMID22750088
PMCPMC3568919

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.