Evidence map›Paper›PMID 22748380›Full record

ArticleBioorganic & medicinal chemistry2012

DNA damage by C1027 involves hydrogen atom abstraction and addition to nucleobases.

Joanna Maria N San Pedro, Terry A Beerman, Marc M Greenberg

Abstract read
In one paragraph

Article in Bioorganic & medicinal chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed.

  1. Article
  2. Pyrimidine Nucleobase Radical Reactivity in DNA and RNA.Radiation physics and chemistry (Oxford, England : 1993) · 2016
    Article
  3. Reactivity of Nucleic Acid Radicals.Advances in physical organic chemistry · 2016
    Article
  4. Article
  5. Article
  6. DNA damage by histone radicals in nucleosome core particles.Journal of the American Chemical Society · 2014
    Article
  7. 5,6-Dihydropyrimidine peroxyl radical reactivity in DNA.Journal of the American Chemical Society · 2014
    Article
  8. DNA double strand cleavage via interstrand hydrogen atom abstraction.Journal of the American Chemical Society · 2013
    Article
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Joanna Maria N San PedroDepartment of Chemistry, Johns Hopkins University, 3400 N. Charles St., Baltimore, MD 21218, United States.
Terry A Beerman
Marc M Greenberg

Funding

Two-Spirit Films in Indigenous Cancer HealthP30CA016056 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI MARK G FRATTINI · 1985 to 2026
$116.6M
Mechanistic Studies of Nucleic Acid Damage and Their Applications.R01GM054996 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GREENBERG, MARC M · 1997 to 2019
$5.4M
Cellular Responses to Cancer Drug-Induced Genomic BreaksR01CA106312 · NCI · ROSWELL PARK CANCER INSTITUTE CORP · PI BEERMAN, TERRY A · 2005 to 2008
$1.1M
NCI NIH HHS CA106312NCI NIH HHS CA16056NCI NIH HHS P30 CA016056NCI NIH HHS R01 CA106312NIGMS NIH HHS GM-054996NIGMS NIH HHS R01 GM054996
6 · The paper itself

Abstract

C1027 is a potent antitumor agent that damages DNA. It has the unusual ability to produce double strand breaks and interstrand cross-links (ICLs) intracellularly, which enable it to initiate concurrent ataxia-telangiestasia mutated (ATM) and Rad-3 related (ATR) independent damage responses. The latter form of damage is not well characterized. We have examined the effect of DNA sequence on C1027 reactivity and found it to be more diverse than previously thought. In addition, analysis of the chemical stability of ICLs suggests that they result from reaction with the deoxyribose ring on one strand but direct addition to a nucleobase on the opposite strand.

Indexed as

AminoglycosidesDNADNA DamageEnediynesHydrogenMolecular StructurePlasmidsAminoglycosidesC 1027DNAEnediynesHydrogen

Identifiers

PMID22748380
PMCPMC3406177

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.