Evidence map›Paper›PMID 22748127›Full record

ArticleThe FEBS journal2012

Lens epithelium-derived growth factor deSumoylation by Sumo-specific protease-1 regulates its transcriptional activation of small heat shock protein and the cellular response.

Keiichi Ishihara, Nigar Fatma, Biju Bhargavan, Bhavana Chhunchha, Eri Kubo, Sanjib Dey, Yoshihiro Takamura, Anil Kumar, Dhirendra P Singh

Abstract read
In one paragraph

Article in The FEBS journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 13 papers.

0numbers the graph read from it
0cells of the map it votes in
13citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

13 citing papers in PubMed, 16 citations in OpenAlex.

  1. Review
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  5. LEDGF/p75 Is Required for an Efficient DNA Damage Response.International journal of molecular sciences · 2021
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 3 institutions in 2 countries.

Keiichi IshiharaDepartment of Ophthalmology and Visual Sciences, University of Nebraska Medical Center, Omaha, NE, USA.
Nigar Fatma
Biju Bhargavan
Bhavana Chhunchha
Eri Kubo
Sanjib Dey
Yoshihiro Takamura
Anil Kumar
Dhirendra P Singh
University of Nebraska Medical Center · USKanazawa Medical University · JPUniversity of Missouri–Kansas City · US

Funding

Gene regulation by LEDGFR01EY013394 · NEI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SINGH, DHIRENDRA P · 2002 to 2012
$3.0M
Peroxiredoxin 6 and CataractogenesisR01EY017613 · NEI · UNIVERSITY OF NEBRASKA MEDICAL CENTER · PI SINGH, DHIRENDRA P · 2009 to 2010
$743k
NEI NIH HHS EY017613NEI NIH HHS EY-13394NEI NIH HHS R01 EY013394NEI NIH HHS R01 EY017613
6 · The paper itself

Abstract

Lens epithelium-derived growth factor (LEDGF), a ubiquitously expressed nuclear protein, acts by interacting with DNA and protein and is involved in widely varying cellular functions. Despite its importance, the mechanism(s) that regulate naturally occurring LEDGF activity are unidentified. In the present study, we report that LEDGF is constitutively Sumoylated, and that the dynamical regulatory mechanism(s) (i.e. Sumoylation and deSumoylation) act as a molecular switch in modulating the DNA-binding and transcriptional activity of LEDGF with the functional consequences. Using bioinformatics analysis coupled with in vitro and in vivo Sumoylation assays, we found that lysine (K) 364 of LEDGF was Sumoylated, repressing its transcriptional activity. Conversely, mutation of K364 to arginine (R) or deSumoylation by small ubiquitin-like modifier (Sumo)-specific protease-1, a nuclear deSumoylase, enhanced the transactivation capacity of LEDGF and its cellular abundance. The enhancements were directly correlated with an increase in the DNA-binding activity and small heat shock protein transcription of LEDGF, whereas the process was reversed in cells overexpressing Sumo1. Interestingly, cells expressing Sumoylation-deficient pEGFP-K364R protein showed increased cellular survival compared to wild-type LEDGF protein. The findings provide insights into the regulation and regulatory functions of LEDGF in Sumoylation-dependent transcriptional control that may be essential for modifying the physiology of cells to maintain cellular homeostasis. These studies also provide new evidence of the important role of post-translational modification in controlling LEDGF function.

Indexed as

Transcriptional ActivationAmino Acid SequenceAnimalsBase SequenceCells, CulturedCysteine EndopeptidasesDNA PrimersEndopeptidasesHeat-Shock ProteinsHumansIntercellular Signaling Peptides and ProteinsMolecular Sequence DataSequence Homology, Amino AcidSumoylationCysteine EndopeptidasesDNA PrimersEndopeptidasesHeat-Shock ProteinsIntercellular Signaling Peptides and Proteinslens epithelium-derived growth factorSENP1 protein, human

Identifiers

PMID22748127
PMCPMC3470485
OpenAlexW1513724442

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.