Evidence map›Paper›PMID 22745795›Full record

ArticlePloS one2012

DNA polymerase eta participates in the mutagenic bypass of adducts induced by benzo[a]pyrene diol epoxide in mammalian cells.

Alden C Klarer, L Jay Stallons, Tom J Burke, Robert L Skaggs, W Glenn McGregor

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 11 papers.

0numbers the graph read from it
0cells of the map it votes in
11citing papers in PubMed
0.5field-weighted citation impact, top 36% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

11 citing papers in PubMed, 16 citations in OpenAlex.

  1. Article
  2. Article
  3. Article
  4. Review
  5. Mammalian DNA Polymerase Kappa Activity and Specificity.Molecules (Basel, Switzerland) · 2019
    Review
  6. Review
  7. Review
  8. Mutagenic Replication of NChemical research in toxicology · 2017
    Article
  9. Article
  10. Article
  11. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Alden C KlarerDepartment of Biochemistry and Molecular Biology, University of Louisville, Louisville, Kentucky, United States of America.
L Jay Stallons
Tom J Burke
Robert L Skaggs
W Glenn McGregor
University of Louisville · USJames Graham Brown Foundation · US

Funding

UOFL ENVIRONMENTAL HEALTH SCIENCES TRAINING PROGRAMT32ES011564 · NIEHS · UNIVERSITY OF LOUISVILLE · PI David W Hein, John Pierce Wise · 2004 to 2026
$7.1M
Mutagenesis as a novel target for cancer preventionR01CA112197 · NCI · UNIVERSITY OF LOUISVILLE · PI MCGREGOR, WILLIAM G · 2005 to 2008
$856k
Y-family DNA polymerases and cellular responses to benzo[a]pyreneF30ES017730 · NIEHS · UNIVERSITY OF LOUISVILLE · PI KLARER, ALDEN C · 2009 to 2013
$171k
Novel strategies to prevent lung cancerR03CA112664 · NCI · UNIVERSITY OF LOUISVILLE · PI MCGREGOR, WILLIAM G · 2005 to 2006
$145k
NCI NIH HHS R01 CA112197NCI NIH HHS R01-CA112197NCI NIH HHS R03 CA112664NCI NIH HHS R03-CA112664NIEHS NIH HHS F30 ES017730NIEHS NIH HHS F30-ES017730NIEHS NIH HHS T32 ES011564NIEHS NIH HHS T32-ES011564
6 · The paper itself

Abstract

Y-family DNA-polymerases have larger active sites that can accommodate bulky DNA adducts allowing them to bypass these lesions during replication. One member, polymerase eta (pol eta), is specialized for the bypass of UV-induced thymidine-thymidine dimers, correctly inserting two adenines. Loss of pol eta function is the molecular basis for xeroderma pigmentosum (XP) variant where the accumulation of mutations results in a dramatic increase in UV-induced skin cancers. Less is known about the role of pol eta in the bypass of other DNA adducts. A commonly encountered DNA adduct is that caused by benzo[a]pyrene diol epoxide (BPDE), the ultimate carcinogenic metabolite of the environmental chemical benzo[a]pyrene. Here, treatment of pol eta-deficient fibroblasts from humans and mice with BPDE resulted in a significant decrease in Hprt gene mutations. These studies in mammalian cells support a number of in vitro reports that purified pol eta has error-prone activity on plasmids with site-directed BPDE adducts. Sequencing the Hprt gene from this work shows that the majority of mutations are G>T transversions. These data suggest that pol eta has error-prone activity when bypassing BPDE-adducts. Understanding the basis of environmental carcinogen-derived mutations may enable prevention strategies to reduce such mutations with the intent to reduce the number of environmentally relevant cancers.

Indexed as

7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxideAnimalsCells, CulturedDNA AdductsDNA-Directed DNA PolymeraseFibroblastsHumansHypoxanthine PhosphoribosyltransferaseMiceMice, Inbred C57BLMice, KnockoutY-Family DNA Polymerases7,8-Dihydro-7,8-dihydroxybenzo(a)pyrene 9,10-oxideDNA AdductsDNA-Directed DNA PolymeraseHypoxanthine PhosphoribosyltransferaseRad30 proteinY-Family DNA Polymerases

Identifiers

PMID22745795
PMCPMC3380003
OpenAlexW1983338907

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.