Evidence map›Paper›PMID 22745249›Full record

ArticleScience (New York, N.Y.)2012

A programmable dual-RNA-guided DNA endonuclease in adaptive bacterial immunity.

Martin Jinek, Krzysztof Chylinski, Ines Fonfara, Michael Hauer, Jennifer A Doudna, Emmanuelle Charpentier

Open access · greenAbstract read
In one paragraph

Article in Science (New York, N.Y.), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8,273 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
8,273citing papers in PubMed, 1 pooled it
191.3field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8,273 citing papers in PubMed, 1 synthesis or guideline pooled it, 16,935 citations in OpenAlex.

  1. Pooled it
  2. CRISPR/Cas Systems: Biological Basis and Genome Editing Applications.Methods in molecular biology (Clifton, N.J.) · 2027
    Review
  3. Article
  4. Article
  5. Conditional dCas12-Mediated Gene Knockdown and Complementation in Chlamydia.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  6. Article
  7. Electroporation for High-Efficiency Delivery of CRISPR to Hematopoietic Cells.Methods in molecular biology (Clifton, N.J.) · 2027
    Article
  8. Plant signaling & behavior · 2026
    Article
  9. Review
  10. Review
  11. Review
  12. Review
  13. Cas12a chRDNA-mediatedMolecular therapy. Nucleic acids · 2026
    Article
  14. Article
  15. Menaquinone biosynthesis inEngineering microbiology · 2026
    Review
  16. Article
  17. CRISPR/Cas9 mediates precise and efficient gene editing inSynthetic and systems biotechnology · 2026
    Article
  18. Review
  19. Review
  20. Article

8,213 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Martin JinekHoward Hughes Medical Institute, University of California, Berkeley, CA 94720, USA.
Krzysztof Chylinski
Ines Fonfara
Michael Hauer
Jennifer A Doudna
Emmanuelle Charpentier
Howard Hughes Medical Institute · USUniversity of California, Berkeley · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Clustered regularly interspaced short palindromic repeats (CRISPR)/CRISPR-associated (Cas) systems provide bacteria and archaea with adaptive immunity against viruses and plasmids by using CRISPR RNAs (crRNAs) to guide the silencing of invading nucleic acids. We show here that in a subset of these systems, the mature crRNA that is base-paired to trans-activating crRNA (tracrRNA) forms a two-RNA structure that directs the CRISPR-associated protein Cas9 to introduce double-stranded (ds) breaks in target DNA. At sites complementary to the crRNA-guide sequence, the Cas9 HNH nuclease domain cleaves the complementary strand, whereas the Cas9 RuvC-like domain cleaves the noncomplementary strand. The dual-tracrRNA:crRNA, when engineered as a single RNA chimera, also directs sequence-specific Cas9 dsDNA cleavage. Our study reveals a family of endonucleases that use dual-RNAs for site-specific DNA cleavage and highlights the potential to exploit the system for RNA-programmable genome editing.

Indexed as

DNA Breaks, Double-StrandedDNA CleavageInverted Repeat SequencesBacteriophagesBase SequenceDeoxyribonucleases, Type II Site-SpecificMolecular Sequence DataNucleic Acid ConformationPlasmidsRNAStreptococcus pyogenesDeoxyribonucleases, Type II Site-SpecificRNA

Identifiers

PMID22745249
PMCPMC6286148
OpenAlexW2045435533

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.