Evidence map›Paper›PMID 22742417›Full record

ArticleMolecular microbiology2012

Molecular dissection of TatC defines critical regions essential for protein transport and a TatB-TatC contact site.

Holger Kneuper, Barbara Maldonado, Franziska Jäger, Martin Krehenbrink, Grant Buchanan, Rebecca Keller, Matthias Müller, Ben C Berks, Tracy Palmer

Open access · bronzeAbstract read
In one paragraph

Article in Molecular microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.

0numbers the graph read from it
0cells of the map it votes in
27citing papers in PubMed
4.3field-weighted citation impact, top 5% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

27 citing papers in PubMed, 54 citations in OpenAlex.

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  14. A signal sequence suppressor mutant that stabilizes an assembled state of the twin arginine translocase.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  15. Article
  16. Channel crossing: how are proteins shipped across the bacterial plasma membrane?Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2015
    Review
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors at 2 institutions in 1 country.

Holger KneuperDivision of Molecular Microbiology, College of Life Sciences, University of Dundee, Dundee DD1 5EH, UK.
Barbara Maldonado
Franziska Jäger
Martin Krehenbrink
Grant Buchanan
Rebecca Keller
Matthias Müller
Ben C Berks
Tracy Palmer
University of Dundee · GBUniversity of Oxford · GB

Funding

Biotechnology and Biological Sciences Research Council BB/D011140/1Biotechnology and Biological Sciences Research Council BB/D011140/2Biotechnology and Biological Sciences Research Council BB/F02150X/1Biotechnology and Biological Sciences Research Council F02150XMedical Research Council G1001640Medical Research Council G117/519
6 · The paper itself

Abstract

The twin arginine transport (Tat) system transports folded proteins across the prokaryotic cytoplasmic membrane and the plant thylakoid membrane. TatC is the largest and most conserved component of the Tat machinery. It forms a multisubunit complex with TatB and binds the signal peptides of Tat substrates. Here we have taken a random mutagenesis approach to identify substitutions in Escherichia coli TatC that inactivate protein transport. We identify 32 individual amino acid substitutions that abolish or severely compromise TatC activity. The majority of the inactivating substitutions fall within the first two periplasmic loops of TatC. These regions are predicted to have conserved secondary structure and results of extensive amino acid insertion and deletion mutagenesis are consistent with these conserved elements being essential for TatC function. Three inactivating substitutions were identified in the fifth transmembrane helix of TatC. The inactive M205R variant could be suppressed by mutations affecting amino acids in the transmembrane helix of TatB. A physical interaction between TatC helix 5 and the TatB transmembrane helix was confirmed by the formation of a site-specific disulphide bond between TatC M205C and TatB L9C variants. This is the first molecular contact site mapped to single amino acid level between these two proteins.

Indexed as

Amino Acid SequenceAmino Acid SubstitutionEscherichia coliEscherichia coli ProteinsMembrane Transport ProteinsMolecular Sequence DataPolymerase Chain ReactionProtein Structure, SecondaryProtein TransportEscherichia coli ProteinsMembrane Transport ProteinsTatB protein, E coliTatC protein, E coli

Identifiers

PMID22742417
PMCPMC3712464
OpenAlexW2141560226

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.