ArticleFrontiers in genetics2012
Development and use of Ontologies Inside the Neuroscience Information Framework: A Practical Approach.
Article in Frontiers in genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 27 papers.
What it found
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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.
The trial behind it
Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.
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Who cites it
27 citing papers in PubMed.
- NeuroBridge ontology: computable provenance metadata to give the long tail of neuroimaging data a FAIR chance for secondary use.Frontiers in neuroinformatics · 2023Article
- Extending and using anatomical vocabularies in the stimulating peripheral activity to relieve conditions project.Frontiers in neuroinformatics · 2022Article
- Representing Normal and Abnormal Physiology as Routes of Flow in ApiNATOMY.Frontiers in physiology · 2022Article
- MRI-based Parcellation and Morphometry of the Individual Rhesus Monkey Brain: the macaque Harvard-Oxford Atlas (mHOA), a translational system referencing a standardized ontology.Brain imaging and behavior · 2021Article
- Species Classification for Neuroscience Literature Based on Span of Interest Using Sequence-to-Sequence Learning Model.Frontiers in human neuroscience · 2020Article
- A Framework for Collaborative Curation of Neuroscientific Literature.Frontiers in neuroinformatics · 2017Article
- Resource Disambiguator for the Web: Extracting Biomedical Resources and Their Citations from the Scientific Literature.PloS one · 2016Article
- The Disease Ontology: fostering interoperability between biological and clinical human disease-related data.Mammalian genome : official journal of the International Mammalian Genome Society · 2015Article
- OTO: Ontology Term Organizer.BMC bioinformatics · 2015Article
- Disease Ontology 2015 update: an expanded and updated database of human diseases for linking biomedical knowledge through disease data.Nucleic acids research · 2015Article
- A scalable neuroinformatics data flow for electrophysiological signals using MapReduce.Frontiers in neuroinformatics · 2015Article
- Text mining for neuroanatomy using WhiteText with an updated corpus and a new web application.Frontiers in neuroinformatics · 2015Article
- Article
- Modeling the autism spectrum disorder phenotype.Neuroinformatics · 2014Article
- Neuroanatomical domain of the foundational model of anatomy ontology.Journal of biomedical semantics · 2014Article
- Extending the NIF DISCO framework to automate complex workflow: coordinating the harvest and integration of data from diverse neuroscience information resources.Frontiers in neuroinformatics · 2014Article
- Editorial: biological ontologies and semantic biology.Frontiers in genetics · 2014Article
- A neuroinformatics of brain modeling and its implementation in the Brain Operation Database BODB.Neuroinformatics · 2014Article
- Article
- Interdisciplinary perspectives on the development, integration, and application of cognitive ontologies.Frontiers in neuroinformatics · 2014Article
Corrections and comments
PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.
Authors and funding
6 authors.
Funding
Abstract
An initiative of the NIH Blueprint for neuroscience research, the Neuroscience Information Framework (NIF) project advances neuroscience by enabling discovery and access to public research data and tools worldwide through an open source, semantically enhanced search portal. One of the critical components for the overall NIF system, the NIF Standardized Ontologies (NIFSTD), provides an extensive collection of standard neuroscience concepts along with their synonyms and relationships. The knowledge models defined in the NIFSTD ontologies enable an effective concept-based search over heterogeneous types of web-accessible information entities in NIF's production system. NIFSTD covers major domains in neuroscience, including diseases, brain anatomy, cell types, sub-cellular anatomy, small molecules, techniques, and resource descriptors. Since the first production release in 2008, NIF has grown significantly in content and functionality, particularly with respect to the ontologies and ontology-based services that drive the NIF system. We present here on the structure, design principles, community engagement, and the current state of NIFSTD ontologies.
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Registered trials
Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.