ArticleFrontiers in plant science2012
Genetic diversity and relatedness of sweet cherry (prunus avium L.) cultivars based on single nucleotide polymorphic markers.
Article in Frontiers in plant science, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.
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Who cites it
16 citing papers in PubMed, 52 citations in OpenAlex.
- The Development of New SSR Markers and an Assay for Genotyping Sweet Cherry (International journal of molecular sciences · 2026Article
- Plastomic evolution and genetic diversity of cultivated sweet cheery (Prunus avium (L.) L.) in China.BMC plant biology · 2025Article
- Chromosome-level assembly of Prunus serrula Franch genome.Scientific data · 2025Article
- Genetic and Pomological Determination of the Trueness-to-Type of Sweet Cherry Cultivars in the German National Fruit Genebank.Plants (Basel, Switzerland) · 2023Article
- Construction of SNP fingerprint and population genetic analysis of honeysuckle germplasm resources in China.Frontiers in plant science · 2023Article
- Sweet Cherry Diversity and Relationships in Modern and Local Varieties Based on SNP Markers.Plants (Basel, Switzerland) · 2022Article
- Genetic Analysis ofGenetics research · 2022Article
- Towards a Joint International Database: Alignment of SSR Marker Data for European Collections of Cherry Germplasm.Plants (Basel, Switzerland) · 2021Article
- Article
- Construction of a SNP Fingerprinting Database and Population Genetic Analysis of Cigar Tobacco Germplasm Resources in China.Frontiers in plant science · 2021Article
- The development of a novel SNP genotyping assay to differentiate cacao clones.Scientific reports · 2019Article
- Association Mapping Analysis for Fruit Quality Traits inFrontiers in plant science · 2018Article
- Evaluation of multiple approaches to identify genome-wide polymorphisms in closely related genotypes of sweet cherry (Computational and structural biotechnology journal · 2017Article
- The R2R3 MYB transcription factor PavMYB10.1 involves in anthocyanin biosynthesis and determines fruit skin colour in sweet cherry (Prunus avium L.).Plant biotechnology journal · 2016Article
- Genetic diversity, linkage disequilibrium, population structure and construction of a core collection of Prunus avium L. landraces and bred cultivars.BMC plant biology · 2016Article
- Discovery of non-climacteric and suppressed climacteric bud sport mutations originating from a climacteric Japanese plum cultivar (Prunus salicina Lindl.).Frontiers in plant science · 2015Article
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Authors and funding
6 authors at 2 institutions in 2 countries.
Funding
Abstract
Most previous studies on genetic fingerprinting and cultivar relatedness in sweet cherry were based on isoenzyme, RAPD, and simple sequence repeat (SSR) markers. This study was carried out to assess the utility of single nucleotide polymorphism (SNP) markers generated from 3' untranslated regions (UTR) for genetic fingerprinting in sweet cherry. A total of 114 sweet cherry germplasm representing advanced selections, commercial cultivars, and old cultivars imported from different parts of the world were screened with seven SSR markers developed from other Prunus species and with 40 SNPs obtained from 3' UTR sequences of Rainier and Bing sweet cherry cultivars. Both types of marker study had 99 accessions in common. The SSR data was used to validate the SNP results. Results showed that the average number of alleles per locus, mean observed heterozygosity, expected heterozygosity, and polymorphic information content values were higher in SSRs than in SNPs although both set of markers were similar in their grouping of the sweet cherry accessions as shown in the dendrogram. SNPs were able to distinguish sport mutants from their wild type germplasm. For example, "Stella" was separated from "Compact Stella." This demonstrates the greater power of SNPs for discriminating mutants from their original parents than SSRs. In addition, SNP markers confirmed parentage and also determined relationships of the accessions in a manner consistent with their pedigree relationships. We would recommend the use of 3' UTR SNPs for genetic fingerprinting, parentage verification, gene mapping, and study of genetic diversity in sweet cherry.
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