Evidence map›Paper›PMID 22736110›Full record

ArticleMolecular biology reports2012

Molecular characterization, polymorphism and association of porcine SPATA19 gene.

Jin Yong Wang, Jing Lan, Jiugang Zhao, Lei Chen, Yonggang Liu

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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed.

  1. Article
  2. Effect of SNPs on Litter Size in Swine.Current issues in molecular biology · 2024
    Article
  3. Article
  4. Insertion/deletion variants within theJournal of Zhejiang University. Science. B
    Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Jin Yong WangKey laboratory of Pig Industry Sciences, Ministry of Agriculture, Chongqing Academy of Animal Sciences, Rongchang, 402460 Chongqing, China.
Jing Lan
Jiugang Zhao
Lei Chen
Yonggang Liu

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Spermatogenesis associated 19 (SPATA19) is an important reproduction related gene. In this study, we cloned the full-length cDNA sequence of porcine SPATA19 gene through the rapid amplification of cDNA ends (RACE) method. The porcine SPATA19 gene encodes a protein of 154 amino acids which shares high homology with the SPATA19 of ten species: giant panda (87 %), dog (86 %), cattle (84 %), rabbit (78 %), sumatran orangutan (72 %), human (71 %), rhesus monkey (71 %), chimpanzee (70 %), mouse (71 %) and rat (69 %). The phylogenetic analysis revealed that the porcine SPATA19 gene has a closer genetic relationship with the SPATA19 gene of dog. This gene is structured in six exons and five introns as revealed by computer-assisted analysis. PCR-RFLP was established to detect the GU475012:c.515T>C substitution of porcine SPATA19 gene mRNA and association of this mutation with litter size traits was assessed in Large White (n = 100) and Landrace (n = 100) pig populations. Results demonstrated that this polymorphic locus was significantly associated with the litter size of all parities in Large White sows and Landrace sows. Therefore, SPATA19 gene could be an useful candidate gene in selection for increasing litter size in pigs. These data serve as a foundation for further insight into this novel porcine gene.

Indexed as

Polymorphism, Single NucleotideAmino Acid SequenceAnimalsBase SequenceFemaleGene FrequencyGenetic Association StudiesLitter SizeMaleMolecular Sequence DataNucleic Acid Amplification TechniquesPhylogenyPolymorphism, Restriction Fragment LengthSeminal Plasma ProteinsSequence Analysis, DNASus scrofaSeminal Plasma Proteins

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.