Evidence map›Paper›PMID 22736020›Full record

ArticleDigestive diseases and sciences2012

Paradoxically increased FOXP3+ T cells in IBD do not preferentially express the isoform of FOXP3 lacking exon 2.

James D Lord, Karine Valliant-Saunders, Hejin Hahn, Richard C Thirlby, Steven F Ziegler

Open access · greenAbstract read
In one paragraph

Article in Digestive diseases and sciences, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
1.8field-weighted citation impact, top 16% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 44 citations in OpenAlex.

  1. Review
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  4. Article
  5. Review
  6. Review
  7. Article
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  9. Article
  10. Impaired estrogen signaling underlies regulatory T cell loss-of-function in the chronically inflamed intestine.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  11. Review
  12. Review
  13. Article
  14. Mucosal Immunity Related to FOXP3Journal of Korean medical science · 2018
    Article
  15. Article
  16. Alternative Splicing of FOXP3-Virtue and Vice.Frontiers in immunology · 2018
    Review
  17. Article
  18. Crossover Subsets of CD4Digestive diseases and sciences · 2017
    Article
  19. CD4 T Cells in IBD: Crossing the Line?Digestive diseases and sciences · 2017
    Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 2 countries.

James D LordTranslational Research Program, Benaroya Research Institute, Mailstop IN-RC, 1201 Ninth Ave, Seattle, WA 98101-2795, USA. james.lord@vmmc.org
Karine Valliant-Saunders
Hejin Hahn
Richard C Thirlby
Steven F Ziegler
Benaroya Research InstituteVirginia Mason Medical Center · USSeattle University · US

Funding

Intestinal Dendritic Cell Modulation of Regulatory T Cell Function in IBDK08DK081659 · NIDDK · UNIVERSITY OF WASHINGTON · PI LORD, JAMES DANIEL · 2008 to 2012
$739k
NIDDK NIH HHS 1K08DK081659NIDDK NIH HHS K08 DK081659
6 · The paper itself

Abstract

backgroundForkhead box P3 (FOXP3)+ regulatory T cells (Tregs) are critical for controlling inflammation in the gastrointestinal tract. There is a paradoxical increase of mucosal FOXP3+ T cells in patients with inflammatory bowel disease (IBD). These FOXP3+ cells were recently shown to include interleukin (IL)-17A-producing cells in Crohn's disease, resembling Th17 cells implicated in autoimmune diseases. FOXP3 inhibits IL-17A production, but a naturally occurring splice variant of FOXP3 lacking exon 2 (Δexon2) cannot.

aimsWe hypothesized that IBD patients preferentially express the Δexon2 variant of FOXP3 so the paradoxically increased mucosal Tregs in IBD could represent cells expressing only Δexon2.

methodsWe used antibodies and primers that can distinguish between the full-length and Δexon2 splice variant of FOXP3 to evaluate expression of these isoforms in human intestinal tissue by immunohistochemistry and quantitative polymerase chain reaction (PCR), respectively.

resultsNo difference in the expression pattern of Δexon2 relative to full-length FOXP3 was seen in ulcerative colitis or Crohn's disease versus non-IBD controls. By immunofluorescence microscopy and flow cytometry, we also did not find individual cells which expressed FOXP3 protein exclusively in the Δexon2 isoform in either IBD or control tissue. FOXP3+ mucosal CD4+ T cells from both IBD and control specimens were able to make IL-17A in vitro after phorbol myristate acetate (PMA) and ionomycin stimulation, but these cells did not preferentially express Δexon2.

conclusionsOur data do not support the hypothesis that selective expression of FOXP3 in the Δexon2 isoform accounts for the inability of copious FOXP3+ T cells to inhibit inflammation or IL-17 expression in IBD.

Indexed as

Analysis of VarianceBiopsyExonsFlow CytometryForkhead Transcription FactorsHumansImmunohistochemistryInflammatory Bowel DiseasesInterleukin-17Intestinal MucosaPolymerase Chain ReactionTh17 CellsT-Lymphocytes, RegulatoryForkhead Transcription FactorsFOXP3 protein, humanInterleukin-17

Identifiers

PMID22736020
PMCPMC3482978
OpenAlexW2060620440

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.