Evidence map›Paper›PMID 22735703›Full record

ArticleNucleic acids research2012

RHON1 is a novel ribonucleic acid-binding protein that supports RNase E function in the Arabidopsis chloroplast.

Rhea Stoppel, Nikolay Manavski, Aleks Schein, Gadi Schuster, Marlene Teubner, Christian Schmitz-Linneweber, Jörg Meurer

Open access · goldAbstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 33 papers.

0numbers the graph read from it
0cells of the map it votes in
33citing papers in PubMed
2.3field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

33 citing papers in PubMed, 52 citations in OpenAlex.

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  17. RNA helicases in RNA decay.Biochemical Society transactions · 2018
    Review
  18. Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 2 countries.

Rhea StoppelDepartment Biology 1, Biocenter of the Ludwig-Maximilians-University Munich, Chair of Plant Molecular Biology, Planegg-Martinsried D-82152, Germany.
Nikolay Manavski
Aleks Schein
Gadi Schuster
Marlene Teubner
Christian Schmitz-Linneweber
Jörg Meurer
Technion – Israel Institute of Technology · ILLudwig-Maximilians-Universität München · DE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The Arabidopsis endonuclease RNase E (RNE) is localized in the chloroplast and is involved in processing of plastid ribonucleic acids (RNAs). By expression of a tandem affinity purification-tagged version of the plastid RNE in the Arabidopsis rne mutant background in combination with mass spectrometry, we identified the novel vascular plant-specific and co-regulated interaction partner of RNE, designated RHON1. RHON1 is essential for photoautotrophic growth and together with RNE forms a distinct ∼800 kDa complex. Additionally, RHON1 is part of various smaller RNA-containing complexes. RIP-chip and other association studies revealed that a helix-extended-helix-structured Rho-N motif at the C-terminus of RHON1 binds to and supports processing of specific plastid RNAs. In all respects, such as plastid RNA precursor accumulation, protein pattern, increased number and decreased size of chloroplasts and defective chloroplast development, the phenotype of rhon1 knockout mutants resembles that of rne lines. This strongly suggests that RHON1 supports RNE functions presumably by conferring sequence specificity to the endonuclease.

Indexed as

ArabidopsisArabidopsis ProteinsChloroplastsDimerizationEndoribonucleasesMutationPhenotypePhotosynthesisProtein Structure, TertiaryRNA-Binding ProteinsRNA, ChloroplastRNA, MessengerRNA Processing, Post-TranscriptionalRNA, Ribosomal, 16SRNA, Ribosomal, 23SSequence AlignmentArabidopsis ProteinsEndoribonucleasesRHON1 protein, ArabidopsisRNA-Binding ProteinsRNA, ChloroplastRNA, MessengerRNA, Ribosomal, 16SRNA, Ribosomal, 23SRNase E, Arabidopsis

Identifiers

PMID22735703
PMCPMC3458557
OpenAlexW2168047588

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.