Evidence map›Paper›PMID 22733996›Full record

ArticleMolecular and cellular biology2012

Fcp1 dephosphorylation of the RNA polymerase II C-terminal domain is required for efficient transcription of heat shock genes.

Nicholas J Fuda, Martin S Buckley, Wenxiang Wei, Leighton J Core, Colin T Waters, Danny Reinberg, John T Lis

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
1.9field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 35 citations in OpenAlex.

  1. Targeting CDKs in the RNAPII transcription cycle.Nature reviews. Drug discovery · 2026
    Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Review
  8. Review
  9. Article
  10. Article
  11. Article
  12. Dephosphorylating eukaryotic RNA polymerase II.Biochimica et biophysica acta · 2016
    Review
  13. Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 3 countries.

Nicholas J FudaDepartment of Molecular Biology and Genetics, Cornell University, Ithaca, New York, USA.
Martin S Buckley
Wenxiang Wei
Leighton J Core
Colin T Waters
Danny Reinberg
John T Lis
Cornell University · USHoward Hughes Medical Institute · US

Funding

COORDINATE GENE REGULATION IN ANIMAL CELLSR01GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN T · 1985 to 2020
$8.4M
Initiation of Transcription of Protein Coding GenesR37GM037120 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI REINBERG, DANNY · 2004 to 2013
$4.5M
COORDINATE GENE REGULATION IN ANIMAL CELLSR37GM025232 · NIGMS · CORNELL UNIVERSITY ITHACA · PI LIS, JOHN THOMAS · 1995 to 2004
$2.5M
INITIATION OF TRANSCRIPTION OF PROTEIN CODING GENESR01GM037120 · NIGMS · UNIV OF MED/DENT NJ-R W JOHNSON MED SCH · PI REINBERG, DANNY F · 1986 to 2001
$634k
Molecular dynamics of transcription factors at HS loci in living cellsF32GM087003 · NIGMS · CORNELL UNIVERSITY · PI BUCKLEY, MARTIN S · 2009 to 2011
$151k
Howard Hughes Medical InstituteNIGMS NIH HHS F32 GM087003NIGMS NIH HHS GM087003NIGMS NIH HHS GM25232NIGMS NIH HHS GM37120NIGMS NIH HHS R01 GM025232NIGMS NIH HHS R01 GM037120NIGMS NIH HHS R37 GM025232NIGMS NIH HHS R37 GM037120
6 · The paper itself

Abstract

Fcp1 dephosphorylates the C-terminal domain of the largest subunit of RNA polymerase II (Pol II) to recycle it into a form that can initiate a new round of transcription. Previously, we identified Drosophila Fcp1 as an important factor in optimal Hsp70 mRNA accumulation after heat shock. Here, we examine the role of Fcp1 in transcription of heat shock genes in vivo. We demonstrate that Fcp1 localizes to active sites of transcription including the induced Hsp70 gene. The reduced Hsp70 mRNA accumulation seen by RNA interference (RNAi) depletion of Fcp1 in S2 cells is a result of a loss of Pol II in the coding region of highly transcribed heat shock-induced genes: Hsp70, Hsp26, and Hsp83. Moreover, Fcp1 depletion dramatically increases phosphorylation of the non-chromatin-bound Pol II. Reexpression of either wild-type or catalytically dead versions of Fcp1 demonstrates that both the reduced Pol II levels on heat shock genes and the increased levels of phosphorylated free Pol II are dependent on the catalytic activity of Fcp1. Our results indicate that Fcp1 is required to maintain the pool of initiation-competent unphosphorylated Pol II, and this function is particularly important for the highly transcribed heat shock genes.

Indexed as

Transcriptional ActivationAnimalsCell LineDrosophilaDrosophila ProteinsGene DeletionHeat-Shock ProteinsHeat-Shock ResponseHSP70 Heat-Shock ProteinsPhosphoprotein PhosphatasesPhosphorylationPositive Transcriptional Elongation Factor BProtein Structure, TertiaryRNA InterferenceRNA, MessengerRNA Polymerase IIDrosophila ProteinsFcp1 protein, DrosophilaHeat-Shock ProteinsHsp26 protein, DrosophilaHSP70 Heat-Shock ProteinsHsp83 protein, DrosophilaPhosphoprotein PhosphatasesPositive Transcriptional Elongation Factor BRNA, MessengerRNA Polymerase II

Identifiers

PMID22733996
PMCPMC3421999
OpenAlexW2112673897

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.