Evidence map›Paper›PMID 22733991›Full record

ArticleMolecular and cellular biology2012

GATA6 is required for proliferation, migration, secretory cell maturation, and gene expression in the mature mouse colon.

Eva Beuling, Boaz E Aronson, Luc M D Tran, Kelly A Stapleton, Ellis N ter Horst, Laurens A T M Vissers, Michael P Verzi, Stephen D Krasinski

Open access · bronzeAbstract read
In one paragraph

Article in Molecular and cellular biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed
2.1field-weighted citation impact, top 12% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 48 citations in OpenAlex.

  1. Article
  2. Goblet cell differentiation subgroups in colorectal cancer.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article
  3. Article
  4. Article
  5. Article
  6. Review
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Signals and forces shaping organogenesis of the small intestine.Current topics in developmental biology · 2019
    Review
  13. Article
  14. Review
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. GATA factors in endocrine neoplasia.Molecular and cellular endocrinology · 2016
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Eva BeulingDivision of Gastroenterology and Nutrition, Department of Medicine, Children's Hospital Boston, and Harvard Medical School, Boston, Massachusetts, USA.
Boaz E Aronson
Luc M D Tran
Kelly A Stapleton
Ellis N ter Horst
Laurens A T M Vissers
Michael P Verzi
Stephen D Krasinski
Boston Children's Hospital · USHarvard University · USDana-Farber Cancer Institute · USUniversity of Amsterdam · NL

Funding

STRUCTURE-FUNCTION RELATIONSHIPS IN THE ALIMENTARY TRACTP30DK034854 · NIDDK · HARVARD UNIVERSITY (MEDICAL SCHOOL) · PI LYNN BRY · 1986 to 2026
$32.4M
Regulation of Intestinal Gene ExpressionR01DK061382 · NIDDK · CHILDREN'S HOSPITAL BOSTON · PI KRASINSKI, STEPHEN D · 2003 to 2012
$3.0M
Transcriptional Regulation of the Intestinal EpitheliumK01DK088868 · NIDDK · RUTGERS, THE STATE UNIV OF N.J. · PI VERZI, MICHAEL P. · 2010 to 2014
$740k
NIDDK NIH HHS 5P30-DK-34854NIDDK NIH HHS K01 DK088868NIDDK NIH HHS K01-DK-088868NIDDK NIH HHS P30 DK034854NIDDK NIH HHS R01 DK061382NIDDK NIH HHS R01-DK-061382
6 · The paper itself

Abstract

Controlled renewal of the epithelium with precise cell distribution and gene expression patterns is essential for colonic function. GATA6 is expressed in the colonic epithelium, but its function in the colon is currently unknown. To define GATA6 function in the colon, we conditionally deleted Gata6 throughout the epithelium of small and large intestines of adult mice. In the colon, Gata6 deletion resulted in shorter, wider crypts, a decrease in proliferation, and a delayed crypt-to-surface epithelial migration rate. Staining techniques and electron microscopy indicated deficient maturation of goblet cells, and coimmunofluorescence demonstrated alterations in specific hormones produced by the endocrine L cells and serotonin-producing cells. Specific colonocyte genes were significantly downregulated. In LS174T, the colonic adenocarcinoma cell line, Gata6 knockdown resulted in a significant downregulation of a similar subset of goblet cell and colonocyte genes, and GATA6 was found to occupy active loci in enhancers and promoters of some of these genes, suggesting that they are direct targets of GATA6. These data demonstrate that GATA6 is necessary for proliferation, migration, lineage maturation, and gene expression in the mature colonic epithelium.

Indexed as

AnimalsCell DifferentiationCell LineColonEpithelial CellsFemaleGATA6 Transcription FactorGene DeletionGene Expression RegulationGoblet CellsIntestinal MucosaMaleMiceGata6 protein, mouseGATA6 Transcription Factor

Identifiers

PMID22733991
PMCPMC3422006
OpenAlexW2159396991

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.