Evidence map›Paper›PMID 22733768›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

General secretion signal for the mycobacterial type VII secretion pathway.

Maria H Daleke, Roy Ummels, Punto Bawono, Jaap Heringa, Christina M J E Vandenbroucke-Grauls, Joen Luirink, Wilbert Bitter

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 122 papers.

0numbers the graph read from it
0cells of the map it votes in
122citing papers in PubMed
10.9field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

122 citing papers in PubMed, 198 citations in OpenAlex.

  1. Review
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  14. The PE/PPE family proteins ofFrontiers in immunology · 2025
    Review
  15. Article
  16. PE/PPE Proteome and ESX-5 Substrate Spectrum inInternational journal of molecular sciences · 2024
    Article
  17. New insights into the domain of unknown function (DUF) of EccCActa crystallographica. Section D, Structural biology · 2024
    Article
  18. Review
  19. Article
  20. Structure of a tripartite protein complex that targets toxins to the type VII secretion system.Proceedings of the National Academy of Sciences of the United States of America · 2024
    Article

62 more citing papers are in PubMed but not listed here.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 1 institution in 1 country.

Maria H DalekeDepartment of Medical Microbiology and Infection Control, VU University Medical Centre, 1081 BT Amsterdam, The Netherlands.
Roy Ummels
Punto Bawono
Jaap Heringa
Christina M J E Vandenbroucke-Grauls
Joen Luirink
Wilbert Bitter
Amsterdam UMC Location VUmc · NL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Mycobacterial pathogens use specialized type VII secretion (T7S) systems to transport crucial virulence factors across their unusual cell envelope into infected host cells. These virulence factors lack classical secretion signals and the mechanism of substrate recognition is not well understood. Here we demonstrate that the model T7S substrates PE25/PPE41, which form a heterodimer, are targeted to the T7S pathway ESX-5 by a signal located in the C terminus of PE25. Site-directed mutagenesis of residues within this C terminus resulted in the identification of a highly conserved motif, i.e., YxxxD/E, which is required for secretion. This motif was also essential for the secretion of LipY, another ESX-5 substrate. Pathogenic mycobacteria have several different T7S systems and we identified a PE protein that is secreted by the ESX-1 system, which allowed us to compare substrate recognition of these two T7S systems. Surprisingly, this ESX-1 substrate contained a C-terminal signal functionally equivalent to that of PE25. Exchange of these C-terminal secretion signals between the PE proteins restored secretion, but each PE protein remained secreted via its own ESX secretion system, indicating that an additional signal(s) provides system specificity. Remarkably, the YxxxD/E motif was also present in and required for efficient secretion of the ESX-1 substrates CFP-10 and EspB. Therefore, our data show that the YxxxD/E motif is a general secretion signal that is present in all known mycobacterial T7S substrates or substrate complexes.

Indexed as

Amino Acid MotifsAmino Acid SequenceAntigens, BacterialBacterial ProteinsGenome, BacterialModels, BiologicalMolecular Sequence DataMultigene FamilyMycobacteriumMycobacterium marinumMycobacterium tuberculosisProtein Structure, TertiarySecretory PathwaySequence Homology, Amino AcidVirulence FactorsAntigens, BacterialBacterial ProteinsVirulence Factors

Identifiers

PMID22733768
PMCPMC3396530
OpenAlexW2077700749

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.