Evidence map›Paper›PMID 22733738›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Evolutionarily conserved glycan signal to degrade aberrant brassinosteroid receptors in Arabidopsis.

Zhi Hong, Hiroyuki Kajiura, Wei Su, Hua Jin, Akihisa Kimura, Kazuhito Fujiyama, Jianming Li

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 42 papers.

0numbers the graph read from it
0cells of the map it votes in
42citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

42 citing papers in PubMed.

  1. Review
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  8. Review
  9. Molecular Lesions in BRI1 and Its Orthologs in the Plant Kingdom.International journal of molecular sciences · 2024
    Review
  10. Article
  11. Article
  12. Article
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  16. Article
  17. Cracking the "Sugar Code": A Snapshot ofFrontiers in plant science · 2021
    Review
  18. Article
  19. Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Zhi HongDepartment of Molecular, Cellular, and Developmental Biology, University of Michigan, Ann Arbor, MI 48109, USA. zhihong@nju.edu.cn
Hiroyuki Kajiura
Wei Su
Hua Jin
Akihisa Kimura
Kazuhito Fujiyama
Jianming Li

Funding

MOLECULAR GENETIC STUDIES OF PLANT STEROID SIGNALINGR01GM060519 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI LI, JIANMING · 2000 to 2008
$2.3M
NIGMS NIH HHS GM060519NIGMS NIH HHS R01 GM060519
6 · The paper itself

Abstract

Asparagine-linked glycans (N-glycans) are crucial signals for protein folding, quality control, and endoplasmic reticulum (ER)-associated degradation (ERAD) in yeast and mammals. Although similar ERAD processes were reported in plants, little is known about their biochemical mechanisms, especially their relationships with N-glycans. Here, we show that a missense mutation in the Arabidopsis EMS-mutagenized bri1 suppressor 3 (EBS3) gene suppresses a dwarf mutant, bri1-9, the phenotypes of which are caused by ER retention and ERAD of a brassinosteroid receptor, BRASSINOSTEROID-INSENSITIVE 1 (BR1). EBS3 encodes the Arabidopsis ortholog of the yeast asparagine-linked glycosylation 9 (ALG9), which catalyzes the ER luminal addition of two terminal α1,2 mannose (Man) residues in assembling the three-branched N-glycan precursor [glucose(Glc)](3)(Man)(9)[N-acetylglucosamine(GlcNAc)](2). Consistent with recent discoveries revealing the importance of the Glc(3)Man(9)GlcNAc(2) C-branch in generating an ERAD signal, the ebs3-1 mutation prevents the Glc(3)Man(9)GlcNAc(2) assembly and inhibits the ERAD of bri1-9. By contrast, overexpression of EBS4 in ebs3-1 bri1-9, which encodes the Arabidopsis ortholog of the yeast ALG12 catalyzing the ER luminal α1,6 Man addition, adds an α1,6 Man to the truncated N-glycan precursor accumulated in ebs3-1 bri1-9, promotes the bri1-9 ERAD, and neutralizes the ebs3-1 suppressor phenotype. Furthermore, a transfer (T)-DNA insertional alg3-T2 mutation, which causes accumulation of an even smaller N-glycan precursor carrying a different exposed α1,6 Man, promotes the ERAD of bri1-9 and enhances its dwarfism. Taken together, our results strongly suggest that the glycan signal to mark an ERAD client in Arabidopsis is likely conserved to be an α1,6 Man-exposed N-glycan.

Indexed as

ArabidopsisArabidopsis ProteinsBrassinosteroidsCloning, MolecularEndoplasmic ReticulumEvolution, MolecularGenetic Complementation TestGlucosyltransferasesGlycosylationMutationMutation, MissensePhenotypePlant ProteinsPlants, Genetically ModifiedPolysaccharidesProtein KinasesArabidopsis ProteinsBrassinosteroidsBRI1 protein, ArabidopsisGlucosyltransferasesmannosylglycoprotein 1,3-glucosyltransferasePlant ProteinsPolysaccharidesProtein Kinases

Identifiers

PMID22733738
PMCPMC3396513

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.