Evidence map›Paper›PMID 22733730›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2012

Structure and permeation mechanism of a mammalian urea transporter.

Elena J Levin, Yu Cao, Giray Enkavi, Matthias Quick, Yaping Pan, Emad Tajkhorshid, Ming Zhou

Open access · bronzeAbstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 46 papers.

0numbers the graph read from it
0cells of the map it votes in
46citing papers in PubMed
4.6field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

46 citing papers in PubMed, 82 citations in OpenAlex.

  1. Review
  2. Article
  3. Review
  4. Article
  5. Protein Structures of Urea Transporters.Sub-cellular biochemistry · 2025
    Review
  6. Transport Characteristics of Urea Transporters.Sub-cellular biochemistry · 2025
    Review
  7. Review
  8. Article
  9. Conformational coupling of redox-driven NaNature structural & molecular biology · 2023
    Article
  10. Article
  11. Article
  12. Article
  13. Article
  14. Review
  15. Article
  16. Urea transport and hydrolysis in the rumen: A review.Animal nutrition (Zhongguo xu mu shou yi xue hui) · 2021
    Review
  17. Review
  18. Article
  19. Urea-aromatic interactions in biology.Biophysical reviews · 2020
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Elena J LevinDepartment of Physiology and Cellular Biophysics, College of Physicians and Surgeons, Columbia University, 630 West 168th Street, New York, NY 10032, USA.
Yu Cao
Giray Enkavi
Matthias Quick
Yaping Pan
Emad Tajkhorshid
Ming Zhou
Columbia University · USUniversity of Illinois Urbana-Champaign · US

Funding

Synthetic Antigen Binder CoreU54GM087519 · NIGMS · UNIVERSITY OF CHICAGO · PI BEZANILLA, FRANCISCO J · 2010 to 2017
$31.9M
WHOLE CELL SIMULATIONP41RR005969 · NCRR · UNIVERSITY OF ILLINOIS URBANA-CHAMPAIGN · PI STONE, JOHN H · 1990 to 2011
$19.8M
Case Center for Synchrotron BiosciencesP30EB009998 · NIBIB · CASE WESTERN RESERVE UNIVERSITY · PI CHANCE, MARK R · 2009 to 2018
$8.4M
Multidisciplinary Training in Translational Cardiovascular ResearchT32HL087745 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI MARKS, ANDREW ROBERT · 2007 to 2011
$1.8M
Structure and function of urea transportersR01DK088057 · NIDDK · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHOU, MING · 2010 to 2014
$1.7M
Molecular Mechanisms of Active Transport Across Cellular MembranesR01GM086749 · NIGMS · UNIVERSITY OF ILLINOIS AT URBANA-CHAMPAIGN · PI TAJKHORSHID, EMAD · 2009 to 2013
$1.5M
Structure and Function of a Phosphorylation Coupled Saccharide TransporterR01GM098878 · NIGMS · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI ZHOU, MING · 2011 to 2014
$1.2M
NCRR NIH HHS P41 RR005969NCRR NIH HHS P41RR05969NHLBI NIH HHS T32 HL087745NHLBI NIH HHS T32HL087745NIBIB NIH HHS P30 EB009998NIDDK NIH HHS R01 DK088057NIDDK NIH HHS R01DK088057NIGMS NIH HHS R01 GM086749NIGMS NIH HHS R01GM086749NIGMS NIH HHS R01 GM098878NIGMS NIH HHS U54 GM087519NIGMS NIH HHS U54GM087519
6 · The paper itself

Abstract

As an adaptation to infrequent access to water, terrestrial mammals produce urine that is hyperosmotic to plasma. To prevent osmotic diuresis by the large quantity of urea generated by protein catabolism, the kidney epithelia contain facilitative urea transporters (UTs) that allow rapid equilibration between the urinary space and the hyperosmotic interstitium. Here we report the first X-ray crystal structure of a mammalian UT, UT-B, at a resolution of 2.36 Å. UT-B is a homotrimer and each protomer contains a urea conduction pore with a narrow selectivity filter. Structural analyses and molecular dynamics simulations showed that the selectivity filter has two urea binding sites separated by an approximately 5.0 kcal/mol energy barrier. Functional studies showed that the rate of urea conduction in UT-B is increased by hypoosmotic stress, and that the site of osmoregulation coincides with the location of the energy barrier.

Indexed as

AnimalsCattleCloning, MolecularCrystallography, X-RayHumansKidneyLigandsLiposomesMembrane Transport ProteinsMetabolismModels, MolecularMolecular ConformationMolecular Dynamics SimulationOsmosisProteinsUreaLigandsLiposomesMembrane Transport ProteinsProteinsUreaUrea Transporters

Identifiers

PMID22733730
PMCPMC3396522
OpenAlexW2140428341

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.