Evidence map›Paper›PMID 22733548›Full record

ArticleJournal of molecular recognition : JMR2012

Protein interface remodeling in a chemically induced protein dimer.

Brian R White, Jonathan C T Carlson, Jessie L Kerns, Carston R Wagner

Abstract read
In one paragraph

Article in Journal of molecular recognition : JMR, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Brian R WhiteDepartment of Medicinal Chemistry, College of Pharmacy, University of Minnesota, Minneapolis, MN 55455, USA.
Jonathan C T Carlson
Jessie L Kerns
Carston R Wagner

Funding

Chemistry-Biology Interface Training GrantT32GM008700 · NIGMS · UNIVERSITY OF MINNESOTA TWIN CITIES · PI DISTEFANO, MARK D · 1999 to 2018
$4.0M
Chemically Controlled Assembly of Therapuetic Protein NanostrcturesR01CA120116 · NCI · UNIVERSITY OF MINNESOTA · PI WAGNER, CARSTON R. · 2007 to 2010
$1.2M
Self-Assemblying Immunotherapeutic NanoringsR01CA125360 · NCI · UNIVERSITY OF MINNESOTA · PI WAGNER, CARSTON R. · 2008 to 2011
$1.2M
NCI NIH HHS CA120116NCI NIH HHS CA125360NCI NIH HHS R01 CA120116NCI NIH HHS R01 CA125360NIGMS NIH HHS T32 GM008700
6 · The paper itself

Abstract

Although the development of chemically induced, self-assembled protein-based materials is rapidly expanding, methods for directing their assembly in solution are sparse, and problems of population heterogeneity remain. By exerting control over the assembly of advanced protein structures, new classes of ordered protein nanomaterials become feasible, affecting numerous applications ranging from therapeutics to nanostructural engineering. Focusing on a protein-based method for modulating the stability of a chemically induced dihydrofolate reductase (DHFR) dimer, we demonstrate the sensitivity of a methotrexate competition assay in determining the change in DHFR-DHFR binding cooperativity via interfacial mutations over a 1.3 kcal/mol range. This represents a change of more than 40% of the dimer complex binding energy conferred from protein-protein cooperativity (~3.1 kcal/mol). With the development of this investigative system and refinement of protein-based techniques for complex stability modulation, the directed assembly of protein nanomaterials into heterocomplexes and a concomitant decrease in population heterogeneity becomes a realizable goal.

Indexed as

Amino Acid SubstitutionBinding, CompetitiveDose-Response Relationship, DrugEnzyme InhibitorsEscherichia coli ProteinsFolic Acid AntagonistsMethotrexateModels, MolecularMutagenesis, Site-DirectedMutant ProteinsOsmolar ConcentrationProtein Interaction Domains and MotifsProtein MultimerizationProtein Structure, QuaternaryTetrahydrofolate DehydrogenaseUp-RegulationEnzyme InhibitorsEscherichia coli ProteinsFolic Acid AntagonistsMethotrexateMutant ProteinsTetrahydrofolate Dehydrogenase

Identifiers

PMID22733548
PMCPMC5568899

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.