Evidence map›Paper›PMID 22733491›Full record

ArticleMolecular biology reports2012

Differentially regulated functional gene clusters identified in early hypoxic cardiomyocytes.

Do Kyun Kim, Eunmi Choi, Byeong-Wook Song, Min-Ji Cha, Onju Ham, Se-Yeon Lee, Chang Youn Lee, Jun-Hee Park, Heesang Song, Ki-Chul Hwang

Abstract read
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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 6 papers.

0numbers the graph read from it
0cells of the map it votes in
6citing papers in PubMed
0.4field-weighted citation impact, top 32% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

6 citing papers in PubMed, 7 citations in OpenAlex.

  1. Article
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  5. Article
  6. Model systems for cardiovascular regenerative biology.Cold Spring Harbor perspectives in medicine · 2013
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 4 institutions in 1 country.

Do Kyun KimDivision of Thoracic and Cardiovascular Surgery, National Health Insurance Cooperated Ilsan Hospital, 100 Ilsan-ro, Ilsandong-gu, Goyang-si, Gyeongi-do, Republic of Korea.
Eunmi Choi
Byeong-Wook Song
Min-Ji Cha
Onju Ham
Se-Yeon Lee
Chang Youn Lee
Jun-Hee Park
Heesang Song
Ki-Chul Hwang
Yonsei University · KRChosun University · KRNational Health Insurance Service Ilsan Hospital · KRSeverance Hospital · KR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Pathological stress including myocardial infarction and hypertension causes a negative effect on calcium regulation and homeostasis. Nevertheless, few studies reveal that Ca(2+) regulatory genes are related to pathological status in cardiomyocytes under early hypoxia. To determine the alteration of Ca(2+)-related gene in hypoxic myocytes, primary neonatal rat ventricular cardiomyocytes (NRVCMs) was isolated. Survival of hypoxic NRVCMs was significantly decreased in 6 h. We confirmed an increase of reactive oxygen species (ROS) generation and Ca(2+) overload in hypoxic NRVCMs by using 2',7'-dichlorodihydro-fluorescein diacetate (H2DCFDA) and FACS analysis. Furthermore, survival/apoptotic signals were also regulated in same condition. The expression profiles of more than 30,000 genes from NRVCMs that were subjected to early hypoxia revealed 630 genes that were differentially regulated. The intracellular Na(+) overload and Ca(2+) handling genes with at least two-fold changes were confirmed. The levels of Ca(2+)-handling proteins (calsequestrin, calmodulin, and calreticulin), ion channels (NCX, Na(+)-K(+)-ATPase, SERCA2a, and PLB), and stress markers (RyR2, ANP, and BNP) were significantly altered in early hypoxia. These results demonstrate that early hypoxia alters Ca(2+)-related gene expression in NRVCMs, leading to pathological status.

Indexed as

Gene Expression RegulationMultigene FamilyTranscriptomeAnimalsCalcium-Binding ProteinsCell HypoxiaCell ProliferationCells, CulturedCell SurvivalCluster AnalysisIon ChannelsMuscle ProteinsMyocytes, CardiacRatsRats, Sprague-DawleyCalcium-Binding ProteinsIon ChannelsMuscle Proteins

Identifiers

PMID22733491
OpenAlexW2077684170

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.