Evidence map›Paper›PMID 22733444›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2012

Molecular diversity, genomic constitution, and QTL mapping of fiber quality by mapped SSRs in introgression lines derived from Gossypium hirsutum × G. darwinii Watt.

Bin Wang, Yichun Nie, Zhongxu Lin, Xianlong Zhang, Junjie Liu, Jing Bai

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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 16 papers.

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16citing papers in PubMed
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3 · Its place in the literature

Who cites it

16 citing papers in PubMed.

  1. Review
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  10. Fine mapping and candidate gene analysis of qFL-chr1, a fiber length QTL in cotton.TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik · 2017
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4 · The record

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5 · Who and what money

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6 authors.

Bin WangNational Key Laboratory of Crop Genetic Improvement and National Centre of Plant Gene Research (Wuhan), Huazhong Agricultural University, Wuhan, 430070, Hubei, People's Republic of China.
Yichun Nie
Zhongxu Lin
Xianlong Zhang
Junjie Liu
Jing Bai

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Because the genetic basis of current upland cotton cultivars is narrow, exploring new germplasm resources and discovering novel alleles relevant to important agronomic traits have become two of the most important themes in the field of cotton research. In this study, G. darwinii Watt, a wild cotton species, was crossed with four upland cotton cultivars with desirable traits. A total of 105 introgression lines (ILs) were successfully obtained. By using 310 mapped SSRs evenly distributed across the interspecific linkage map of G. hirsutum × G. barbadense, these 105 ILs and their corresponding parents were analyzed. A total of 278 polymorphic loci were detected among the 105 ILs, and the average length of introgression segments accumulated to 333.5 cM, accounting for 6.7 % of the whole genome. These lines included many variations. However, high similarity coefficients existed between lines, even between those derived from different parents. Finally, all the ILs and their upland cotton parents were used for association mapping of fiber quality in three environments. A total of 40 SSRs were found to be associated with five fiber quality indexes (P < 0.05) with some being detected in multiple environments and traits. The contribution rate for trait variation was 6.31 % on average, ranging from 2.00 to 14.79 %. This study develops novel ILs for cotton genetics and breeding and provides the basis for future research into fine mapping of genes related to fiber quality, analyses of candidate gene association, and molecular marker-assisted breeding.

Indexed as

Chromosome MappingGenome, PlantMicrosatellite RepeatsQuantitative Trait LociAllelesBreedingChromosomes, PlantCotton FiberCrosses, GeneticGossypiumPhenotype

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.