Evidence map›Paper›PMID 22732570›Full record

ArticleDevelopmental biology2012

Xenopus laevis zygote arrest 2 (zar2) encodes a zinc finger RNA-binding protein that binds to the translational control sequence in the maternal Wee1 mRNA and regulates translation.

Amanda Charlesworth, Tomomi M Yamamoto, Jonathan M Cook, Kevin D Silva, Cassandra V Kotter, Gwendolyn S Carter, Justin W Holt, Heather F Lavender, Angus M MacNicol, Yi Ying Wang and 1 more

Abstract read
In one paragraph

Article in Developmental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed, 31 citations in OpenAlex.

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  15. Specificity factors in cytoplasmic polyadenylation.Wiley interdisciplinary reviews. RNA
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors at 4 institutions in 1 country.

Amanda CharlesworthDepartment of Integrative Biology, University of Colorado Denver, 80217, USA. amanda.charlesworth@ucdenver.edu
Tomomi M Yamamoto
Jonathan M Cook
Kevin D Silva
Cassandra V Kotter
Gwendolyn S Carter
Justin W Holt
Heather F Lavender
Angus M MacNicol
Yi Ying Wang
Anna Wilczynska
University of Arkansas for Medical Sciences · USUniversity of Colorado Denver · USUniversity of Charleston · USWinthrop Rockefeller Foundation · US

Funding

University of Colorado Cancer Center Support Grant - Lung Cancer Patient-Derived Xenografts with Autologous Human Immune SystemsP30CA046934 · NCI · UNIVERSITY OF COLORADO DENVER · PI James V Degregori · 1988 to 2026
$117.0M
PHYSIOLOGICAL DISTURBANCES ASSOCIATED WITH NEONATAL INTRAVENTRICULAR HEMORRHAGEP20RR020146 · NCRR · UNIV OF ARKANSAS FOR MED SCIS · PI GARCIA-RILL, EDGAR E. · 2004 to 2011
$17.2M
Telemedicine CoreP30GM110702 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI GARCIA-RILL, EDGAR E. · 2014 to 2018
$6.1M
The University of Arkansas for Medical Sciences Initiative for Maximizing Student Development ProgramR25GM083247 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI MCGEHEE, ROBERT E, THOMAS, BILLY R · 2009 to 2023
$5.4M
Center for Translational NeuroscienceP20GM103425 · NIGMS · UNIV OF ARKANSAS FOR MED SCIS · PI GARCIA-RILL, EDGAR E. · 2012 to 2013
$4.1M
Maternal gene regulation in early veterbrate developmentR01HD035688 · NICHD · UNIV OF ARKANSAS FOR MED SCIS · PI MACNICOL, ANGUS M · 1999 to 2011
$2.5M
NCI NIH HHS P30 CA046934NCI NIH HHS P30CA046934NCRR NIH HHS P20 RR020146NCRR NIH HHS RR20146NICHD NIH HHS R01 HD035688NICHD NIH HHS R01HD35688NIGMS NIH HHS P20 GM103425NIGMS NIH HHS P30 GM110702NIGMS NIH HHS R25 GM083247
6 · The paper itself

Abstract

Zygote arrest (Zar) proteins are crucial for early embryonic development, but their molecular mechanism of action is unknown. The Translational Control Sequence (TCS) in the 3' untranslated region (UTR) of the maternal mRNA, Wee1, mediates translational repression in immature Xenopus oocytes and translational activation in mature oocytes, but the protein that binds to the TCS and mediates translational control is not known. Here we show that Xenopus laevis Zar2 (encoded by zar2) binds to the TCS in maternal Wee1 mRNA and represses translation in immature oocytes. Using yeast 3 hybrid assays and electrophoretic mobility shift assays, Zar2 was shown to bind specifically to the TCS in the Wee1 3'UTR. RNA binding required the presence of Zn(2+) and conserved cysteines in the C-terminal domain, suggesting that Zar2 contains a zinc finger. Consistent with regulating maternal mRNAs, Zar2 was present throughout oogenesis, and endogenous Zar2 co-immunoprecipitated endogenous Wee1 mRNA from immature oocytes, demonstrating the physiological significance of the protein-RNA interaction. Interestingly, Zar2 levels decreased during oocyte maturation. Dual luciferase reporter tethered assays showed that Zar2 repressed translation in immature oocytes. Translational repression was relieved during oocyte maturation and this coincided with degradation of Zar2 during maturation. This is the first report of a molecular function of zygote arrest proteins. These data show that Zar2 contains a zinc finger and is a trans-acting factor for the TCS in maternal mRNAs in immature Xenopus oocytes.

Indexed as

3' Untranslated RegionsAmino Acid SequenceAnimalsBase SequenceBinding SitesCell Cycle ProteinsDNA PrimersFemaleMolecular Sequence DataOocytesOogenesisProtein BiosynthesisProtein-Tyrosine KinasesRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, Messenger3' Untranslated RegionsCell Cycle ProteinsDNA PrimersProtein-Tyrosine KinasesRecombinant Fusion ProteinsRNA-Binding ProteinsRNA, MessengerWEE1 protein, XenopusXenopus ProteinsZar2 protein, Xenopus

Identifiers

PMID22732570
PMCPMC3423596
OpenAlexW2015298443

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.