Evidence map›Paper›PMID 22731252›Full record

ArticleThe Biochemical journal2012

Characterization of cytoskeletal protein 4.1R interaction with NHE1 (Na(+)/H(+) exchanger isoform 1).

Wataru Nunomura, Sheryl P Denker, Diane L Barber, Yuichi Takakuwa, Philippe Gascard

Abstract read
In one paragraph

Article in The Biochemical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.5field-weighted citation impact, top 19% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 22 citations in OpenAlex.

  1. Tubulin-mediated anatomical and functional changes caused by CaJournal of physiology and biochemistry · 2023
    Article
  2. Review
  3. Article
  4. Na+-H+ exchanger-1 (NHE1) regulation in kidney proximal tubule.Cellular and molecular life sciences : CMLS · 2015
    Review
  5. DAL-1 attenuates epithelial-to mesenchymal transition in lung cancer.Journal of experimental & clinical cancer research : CR · 2015
    Article
  6. Article
  7. Article
  8. Calcium in red blood cells-a perilous balance.International journal of molecular sciences · 2013
    Review
  9. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 2 institutions in 1 country.

Wataru NunomuraDepartment of Cell and Tissue Biology, University of California San Francisco, San Francisco, CA, USA. nunomura@gipc.akita-u.ac.jp
Sheryl P Denker
Diane L Barber
Yuichi Takakuwa
Philippe Gascard
Akita University · JPTokyo Women's Medical University · JP

Funding

Actions of the Sodium-Hydrogen Exchanger Subtype, NHE1R01GM058642 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN FRANCISCO · PI BARBER, DIANE L · 1999 to 2012
$3.4M
RED CELL CYTOSKELETON PROTEIN 4.1R IN KIDNEY FUNCTIONR01DK056355 · NIDDK · UNIVERSITY OF CALIF-LAWRENC BERKELEY LAB · PI GASCARD, PHILIPPE D · 2000 to 2004
$1.1M
NIDDK NIH HHS R01 DK056355NIGMS NIH HHS R01 GM058642
6 · The paper itself

Abstract

NHE1 (Na(+)/H(+) exchanger isoform 1) has been reported to be hyperactive in 4.1R-null erythrocytes [Rivera, De Franceschi, Peters, Gascard, Mohandas and Brugnara (2006) Am. J. Physiol. Cell Physiol. 291, C880-C886], supporting a functional interaction between NHE1 and 4.1R. In the present paper we demonstrate that 4.1R binds directly to the NHE1cd (cytoplasmic domain of NHE1) through the interaction of an EED motif in the 4.1R FERM (4.1/ezrin/radixin/moesin) domain with two clusters of basic amino acids in the NHE1cd, K(519)R and R(556)FNKKYVKK, previously shown to mediate PIP(2) (phosphatidylinositol 4,5-bisphosphate) binding [Aharonovitz, Zaun, Balla, York, Orlowski and Grinstein (2000) J. Cell. Biol. 150, 213-224]. The affinity of this interaction (K(d) = 100-200 nM) is reduced in hypertonic and acidic conditions, demonstrating that this interaction is of an electrostatic nature. The binding affinity is also reduced upon binding of Ca(2+)/CaM (Ca(2+)-saturated calmodulin) to the 4.1R FERM domain. We propose that 4.1R regulates NHE1 activity through a direct protein-protein interaction that can be modulated by intracellular pH and Na(+) and Ca(2+) concentrations.

Indexed as

Amino Acid SequenceAnimalsBinding SitesCalciumCalmodulinCytoskeletal ProteinsCytoskeletonHydrogen-Ion ConcentrationMembrane ProteinsMolecular Sequence DataProtein IsoformsProtein Structure, TertiaryRatsSequence AlignmentSodium-Hydrogen Exchanger 1Sodium-Hydrogen ExchangersCalciumCalmodulinCytoskeletal Proteinserythrocyte membrane band 4.1 proteinMembrane ProteinsProtein IsoformsSlc9a1 protein, ratSodium-Hydrogen Exchanger 1Sodium-Hydrogen Exchangers

Identifiers

PMID22731252
PMCPMC4338608
OpenAlexW2030665988

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.