Evidence map›Paper›PMID 22729821›Full record

ArticlePlanta2012

Engineering triterpene metabolism in tobacco.

Shuiqin Wu, Zuodong Jiang, Chase Kempinski, S Eric Nybo, Satrio Husodo, Robert Williams, Joe Chappell

Abstract read
In one paragraph

Article in Planta, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 26 papers.

0numbers the graph read from it
0cells of the map it votes in
26citing papers in PubMed
2.0field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

26 citing papers in PubMed, 75 citations in OpenAlex.

  1. Review
  2. Review
  3. Review
  4. Article
  5. Review
  6. Review
  7. Engineering custom morpho- and chemotypes ofFrontiers in plant science · 2023
    Review
  8. Article
  9. The chemotype core collection of genus Nicotiana.The Plant journal : for cell and molecular biology · 2022
    Article
  10. Review
  11. Article
  12. Review
  13. High-Level Patchoulol Biosynthesis inFrontiers in bioengineering and biotechnology · 2020
    Article
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 2 institutions in 1 country.

Shuiqin WuPlant Biology Program, Department of Plant and Soil Sciences, University of Kentucky, Lexington, KY 40546-0312, USA.
Zuodong Jiang
Chase Kempinski
S Eric Nybo
Satrio Husodo
Robert Williams
Joe Chappell
University of Kentucky · USPlant (United States) · US

Funding

Advancing Drug Development from Medicinal Plants using Transcriptomics and MetaboRC2GM092521 · NIGMS · UNIVERSITY OF KENTUCKY · PI CHAPPELL, JOE, DELLAPENNA, DEAN · 2009 to 2010
$6.0M
NIGMS NIH HHS RC2 GM092521
6 · The paper itself

Abstract

Terpenes comprise a distinct class of natural products that serve a diverse range of physiological functions, provide for interactions between plants and their environment and represent a resource for many kinds of practical applications. To better appreciate the importance of terpenes to overall growth and development, and to create a production capacity for specific terpenes of industrial interest, we have pioneered the development of strategies for diverting carbon flow from the native terpene biosynthetic pathways operating in the cytosol and plastid compartments of tobacco for the generation of specific classes of terpenes. In the current work, we demonstrate how difficult it is to divert the 5-carbon intermediates DMAPP and IPP from the mevalonate pathway operating in the cytoplasm for triterpene biosynthesis, yet diversion of the same intermediates from the methylerythritol phosphate pathway operating in the plastid compartment leads to the accumulation of very high levels of the triterpene squalene. This was assessed by the co-expression of an avian farnesyl diphosphate synthase and yeast squalene synthase genes targeting metabolism in the cytoplasm or chloroplast. We also evaluated the possibility of directing this metabolism to the secretory trichomes of tobacco by comparing the effects of trichome-specific gene promoters to strong, constitutive viral promoters. Surprisingly, when transgene expression was directed to trichomes, high-level squalene accumulation was observed, but overall plant growth and physiology were reduced up to 80 % of the non-transgenic controls. Our results support the notion that the biosynthesis of a desired terpene can be dramatically improved by directing that metabolism to a non-native cellular compartment, thus avoiding regulatory mechanisms that might attenuate carbon flux within an engineered pathway.

Indexed as

Biosynthetic PathwaysCytosolGene Expression Regulation, EnzymologicGene Expression Regulation, PlantGenes, PlantGenetic EngineeringMevalonic AcidNicotianaPlants, Genetically ModifiedPlastidsPromoter Regions, GeneticSqualeneTriterpenesMevalonic AcidSqualeneTriterpenes

Identifiers

PMID22729821
PMCPMC3810399
OpenAlexW2027214285

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.