Evidence map›Paper›PMID 22727702›Full record

ArticleCurrent biology : CB2012

CED-1, CED-7, and TTR-52 regulate surface phosphatidylserine expression on apoptotic and phagocytic cells.

James Mapes, Yu-Zen Chen, Anna Kim, Shohei Mitani, Byung-Ho Kang, Ding Xue

Open access · bronzeAbstract readEvaluation Study
In one paragraph

Article in Current biology : CB, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 56 papers.

0numbers the graph read from it
0cells of the map it votes in
56citing papers in PubMed
2.2field-weighted citation impact, top 13% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

56 citing papers in PubMed, 94 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Extracellular vesicles.Genetics · 2024
    Review
  10. Vacuolar HeLife · 2024
    Article
  11. Article
  12. TheProceedings of the National Academy of Sciences of the United States of America · 2023
    Article
  13. Review
  14. eLife · 2022
    Article
  15. Article
  16. Article
  17. Review
  18. Article
  19. SUMO modification in apoptosis.Journal of molecular histology · 2021
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 3 institutions in 3 countries.

James MapesDepartment of Molecular, Cellular, and Developmental Biology, University of Colorado, Boulder, CO 80309, USA.
Yu-Zen Chen
Anna Kim
Shohei Mitani
Byung-Ho Kang
Ding Xue
University of Colorado Boulder · USUniversity of Florida · USTokyo Women's Medical University · JP

Funding

TARGETS OF THE CELL DEATH PROTEASESR01GM059083 · NIGMS · UNIVERSITY OF COLORADO AT BOULDER · PI XUE, DING · 1999 to 2012
$3.7M
Chromatin Degradation During ApoptosisR01GM079097 · NIGMS · UNIVERSITY OF COLORADO · PI XUE, DING · 2007 to 2015
$2.3M
NIGMS NIH HHS GM059083NIGMS NIH HHS GM079097NIGMS NIH HHS R01 GM059083NIGMS NIH HHS R01 GM079097
6 · The paper itself

Abstract

backgroundPhosphatidylserine (PS) normally confined to the cytoplasmic leaflet of plasma membrane (PM) is externalized to the exoplasmic leaflet (exPS) during apoptosis, where it serves as an "eat-me" signal to phagocytes. In addition, some living cells such as macrophages also express exPS.

resultsA secreted Annexin V (sAnxV::GFP) PS sensor reveals that exPS appears early on apoptotic cells in C. elegans embryos and decreases in older or unengulfed apoptotic cells. This decrease in exPS expression is blocked by loss of CED-7, an ATP binding cassette (ABC) transporter, or TTR-52, a secreted PS binding protein. Phagocytic cells also express exPS, which is dependent on the activity of CED-7, TTR-52, and TTR-52-interacting phagocyte receptor CED-1. Interestingly, a secreted lactadherin PS sensor (sGFP::Lact(C1C2)) labels apoptotic cells but not phagocytes, prevents sAnxV::GFP from labeling phagocytes, and compromises phagocytosis. Immuno-electron micrographs of embryos expressing sAnxV::GFP or sGFP::Lact(C1C2) reveal the presence of extracellular PS-containing vesicles between the apoptotic cell and neighboring cells, which are absent or greatly reduced in the ced-7 and ttr-52 mutants, respectively, indicating that CED-7 and TTR-52 promote the generation of extracellular PS vesicles. Loss of the tat-1 gene, which maintains PS asymmetry in the PM, restores phagocyte exPS expression in ced-1, ced-7, and ttr-52 mutants and partially rescues their engulfment defects.

conclusionsCED-7 and TTR-52 may promote the efflux of PS from apoptotic cells through the generation of extracellular PS vesicles, which lead to exPS expression on phagocytes via TTR-52 and CED-1 to facilitate cell corpse clearance.

Indexed as

ApoptosisAnimalsAnnexin A5ATP-Binding Cassette TransportersCaenorhabditis elegansCaenorhabditis elegans ProteinsCarrier ProteinsEmbryo, NonmammalianMembrane ProteinsMicroscopy, ImmunoelectronPhagocytesPhosphatidylserinesAnnexin A5ATP-Binding Cassette TransportersCaenorhabditis elegans ProteinsCarrier Proteinsced-1 protein, C elegansCED-7 protein, C elegansMembrane ProteinsPhosphatidylserinesTTR-52 protein, C elegans

Identifiers

PMID22727702
PMCPMC3816170
OpenAlexW2093124229

What OpenQuestion holds

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LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.