Evidence map›Paper›PMID 22726990›Full record

ArticleBMC microbiology2012

Production of mycobacterial cell wall glycopeptidolipids requires a member of the MbtH-like protein family.

Elizabeth Tatham, Sivagami Sundaram Chavadi, Poornima Mohandas, Uthamaphani R Edupuganti, Shiva K Angala, Delphi Chatterjee, Luis E N Quadri

Open access · goldAbstract read
In one paragraph

Article in BMC microbiology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.8field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 29 citations in OpenAlex.

  1. Article
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  7. An Activator of an Adenylation Domain Revealed by Activity but Not Sequence Homology.Chembiochem : a European journal of chemical biology · 2016
    Article
  8. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors at 3 institutions in 1 country.

Elizabeth TathamDepartment of Biology, Brooklyn College, City University of New York, 2900 Bedford Avenue, Brooklyn, NY 11210, USA.
Sivagami Sundaram Chavadi
Poornima Mohandas
Uthamaphani R Edupuganti
Shiva K Angala
Delphi Chatterjee
Luis E N Quadri
City University of New York · USColorado State University · USBrooklyn College · US

Funding

TB LAM AND AG--STRUCTURES CORRELATED WITH BIOLOGYR01AI037139 · NIAID · COLORADO STATE UNIVERSITY-FORT COLLINS · PI CHATTERJEE, DELPHI · 1996 to 2008
$1.5M
Mycobacterial Siderophores: Assembly, Assembly Inhibition, and Role in VirulenceR01AI075092 · NIAID · WEILL MEDICAL COLL OF CORNELL UNIV · PI QUADRI, LUIS E · 2009 to 2010
$873k
NIAID NIH HHS R01AI075092NIAID NIH HHS R01 AI37139
6 · The paper itself

Abstract

backgroundGlycopeptidolipids (GPLs) are among the major free glycolipid components of the outer membrane of several saprophytic and clinically-relevant Mycobacterium species. The architecture of GPLs is based on a constant tripeptide-amino alcohol core of nonribosomal peptide synthetase origin that is N-acylated with a 3-hydroxy/methoxy acyl chain synthesized by a polyketide synthase and further decorated with variable glycosylation patterns built from methylated and acetylated sugars. GPLs have been implicated in many aspects of mycobacterial biology, thus highlighting the significance of gaining an understanding of their biosynthesis. Our bioinformatics analysis revealed that every GPL biosynthetic gene cluster known to date contains a gene (referred herein to as gplH) encoding a member of the MbtH-like protein family. Herein, we sought to conclusively establish whether gplH was required for GPL production.

resultsDeletion of gplH, a gene clustered with nonribosomal peptide synthetase-encoding genes in the GPL biosynthetic gene cluster of Mycobacterium smegmatis, produced a GPL deficient mutant. Transformation of this mutant with a plasmid expressing gplH restored GPL production. Complementation was also achieved by plasmid-based constitutive expression of mbtH, a paralog of gplH found in the biosynthetic gene cluster for production of the siderophore mycobactin of M. smegmatis. Further characterization of the gplH mutant indicated that it also displayed atypical colony morphology, lack of sliding motility, altered capacity for biofilm formation, and increased drug susceptibility.

conclusionsHerein, we provide evidence formally establishing that gplH is essential for GPL production in M. smegmatis. Inactivation of gplH also leads to a pleiotropic phenotype likely to arise from alterations in the cell envelope due to the lack of GPLs. While genes encoding MbtH-like proteins have been shown to be needed for production of siderophores and antibiotics, our study presents the first case of one such gene proven to be required for production of a cell wall component. Furthermore, our results provide the first example of a mbtH-like gene with confirmed functional role in a member of the Mycobacterium genus. Altogether, our findings demonstrate a critical role of gplH in mycobacterial biology and advance our understanding of the genetic requirements for the biosynthesis of an important group of constituents of the mycobacterial outer membrane.

Indexed as

Amino Acid SequenceBacterial ProteinsBiofilmsCell WallGene DeletionGenetic Complementation TestGlycolipidsGlycopeptidesLipopeptidesLocomotionMicrobial Sensitivity TestsMolecular Sequence DataMycobacterium smegmatisSequence AlignmentBacterial ProteinsGlycolipidsGlycopeptidesLipopeptides

Identifiers

PMID22726990
PMCPMC3537567
OpenAlexW2089380891

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.