Evidence map›Paper›PMID 22723847›Full record

ArticlePloS one2012

A deubiquitylating complex required for neosynthesis of a yeast mitochondrial ATP synthase subunit.

Sophie Kanga, Delphine Bernard, Anne-Marie Mager-Heckel, Zoi Erpapazoglou, Francesca Mattiroli, Titia K Sixma, Sébastien Léon, Danièle Urban-Grimal, Ivan Tarassov, Rosine Haguenauer-Tsapis

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
0.4field-weighted citation impact, top 38% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 9 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 5 institutions in 2 countries.

Sophie KangaInstitut Jacques Monod, CNRS, UMR7592, Univ Paris Diderot, Sorbonne Paris Cité, Paris, France.
Delphine Bernard
Anne-Marie Mager-Heckel
Zoi Erpapazoglou
Francesca Mattiroli
Titia K Sixma
Sébastien Léon
Danièle Urban-Grimal
Ivan Tarassov
Rosine Haguenauer-Tsapis
Délégation Paris 7 · FRCentre National de la Recherche Scientifique · FRThe Netherlands Cancer Institute · NLGénétique Moléculaire Génomique Microbiologie · FRSorbonne Paris Cité · FR

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The ubiquitin system is known to be involved in maintaining the integrity of mitochondria, but little is known about the role of deubiquitylating (DUB) enzymes in such functions. Budding yeast cells deleted for UBP13 and its close homolog UBP9 displayed a high incidence of petite colonies and slow respiratory growth at 37°C. Both Ubp9 and Ubp13 interacted directly with Duf1 (DUB-associated factor 1), a WD40 motif-containing protein. Duf1 activates the DUB activity of recombinant Ubp9 and Ubp13 in vitro and deletion of DUF1 resulted in the same respiratory phenotype as the deletion of both UBP9 and UBP13. We show that the mitochondrial defects of these mutants resulted from a strong decrease at 37°C in the de novo biosynthesis of Atp9, a membrane-bound component of ATP synthase encoded by mitochondrial DNA. The defect appears at the level of ATP9 mRNA translation, while its maturation remained unchanged in the mutants. This study describes a new role of the ubiquitin system in mitochondrial biogenesis.

Indexed as

UbiquitinationEnzyme ActivationGene DeletionGenotypeMitochondriaMitochondrial Proton-Translocating ATPasesOxygen ConsumptionProtein BindingProtein BiosynthesisSaccharomyces cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinated ProteinsMitochondrial Proton-Translocating ATPasesOLI1 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsUbiquitinated Proteins

Identifiers

PMID22723847
PMCPMC3378586
OpenAlexW2060797718

What OpenQuestion holds

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LicenceCC BY
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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.