Evidence map›Paper›PMID 22723483›Full record

ArticleThe Journal of experimental biology2012

A unique alkaline pH-regulated and fatty acid-activated tandem pore domain potassium channel (K₂P) from a marine sponge.

Gregory D Wells, Qiong-Yao Tang, Robert Heler, Gabrielle J Tompkins-MacDonald, Erica N Pritchard, Sally P Leys, Diomedes E Logothetis, Linda M Boland

Open access · greenAbstract read
In one paragraph

Article in The Journal of experimental biology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 4 papers.

0numbers the graph read from it
0cells of the map it votes in
4citing papers in PubMed
0.4field-weighted citation impact, top 37% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

4 citing papers in PubMed, 12 citations in OpenAlex.

  1. Article
  2. Evolution of acid nociception: ion channels and receptors for detecting acid.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2019
    Review
  3. Article
  4. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 3 institutions in 2 countries.

Gregory D WellsUniversity of Richmond, Department of Biology, Richmond, VA 23173, USA.
Qiong-Yao Tang
Robert Heler
Gabrielle J Tompkins-MacDonald
Erica N Pritchard
Sally P Leys
Diomedes E Logothetis
Linda M Boland
University of Richmond · USUniversity of Alberta · CAVirginia Commonwealth University · US

Funding

Structural Determinants of PIP2 RegulationR01HL059949 · NHLBI · VIRGINIA COMMONWEALTH UNIVERSITY · PI Leigh Daniel Plant · 1998 to 2026
$11.6M
Lipid Modulation of Potassium ChannelsR15GM096142 · NIGMS · UNIVERSITY OF RICHMOND · PI BOLAND, LINDA M. · 2011 to 2015
$562k
NHLBI NIH HHS R01 HL059949NHLBI NIH HHS R01 HL59949NIGMS NIH HHS GM096142NIGMS NIH HHS R15 GM096142
6 · The paper itself

Abstract

A cDNA encoding a potassium channel of the two-pore domain family (K(2P), KCNK) of leak channels was cloned from the marine sponge Amphimedon queenslandica. Phylogenetic analysis indicated that AquK(2P) cannot be placed into any of the established functional groups of mammalian K(2P) channels. We used the Xenopus oocyte expression system, a two-electrode voltage clamp and inside-out patch clamp electrophysiology to determine the physiological properties of AquK(2P). In whole cells, non-inactivating, voltage-independent, outwardly rectifying K(+) currents were generated by external application of micromolar concentrations of arachidonic acid (AA; EC(50) ∼30 μmol l(-1)), when applied in an alkaline solution (≥pH 8.0). Prior activation of channels facilitated the pH-regulated, AA-dependent activation of AquK(2P) but external pH changes alone did not activate the channels. Unlike certain mammalian fatty-acid-activated K(2P) channels, the sponge K(2P) channel was not activated by temperature and was insensitive to osmotically induced membrane distortion. In inside-out patch recordings, alkalinization of the internal pH (pK(a) 8.18) activated the AquK(2P) channels independently of AA and also facilitated activation by internally applied AA. The gating of the sponge K(2P) channel suggests that voltage-independent outward rectification and sensitivity to pH and AA are ancient and fundamental properties of animal K(2P) channels. In addition, the membrane potential of some poriferan cells may be dynamically regulated by pH and AA.

Indexed as

AlkaliesAmino Acid SequenceAnimalsAquatic OrganismsArachidonic AcidFatty AcidsHydrogen-Ion ConcentrationIon Channel GatingMolecular Sequence DataOsmosisPhylogenyPoriferaPotassium Channels, Tandem Pore DomainSequence Homology, Amino AcidTemperatureXenopus laevisAlkaliesArachidonic AcidFatty AcidsPotassium Channels, Tandem Pore Domain

Identifiers

PMID22723483
PMCPMC3379850
OpenAlexW2139628056

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.