Evidence map›Paper›PMID 22723376›Full record

ArticleNucleic acids research2012

Reconstitution of translation from Thermus thermophilus reveals a minimal set of components sufficient for protein synthesis at high temperatures and functional conservation of modern and ancient translation components.

Ying Zhou, Haruichi Asahara, Eric A Gaucher, Shaorong Chong

Abstract read
In one paragraph

Article in Nucleic acids research, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 23 papers.

0numbers the graph read from it
0cells of the map it votes in
23citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

23 citing papers in PubMed.

  1. Article
  2. Review
  3. Article
  4. Solid-Phase Cell-Free Protein Synthesis and Its Applications in Biotechnology.Advances in biochemical engineering/biotechnology · 2023
    Article
  5. Early divergence of translation initiation and elongation factors.Protein science : a publication of the Protein Society · 2022
    Article
  6. Review
  7. Differential Contribution of Protein Factors and 70S Ribosome to Elongation.International journal of molecular sciences · 2021
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Flexizyme-Enabled Benchtop Biosynthesis of Thiopeptides.Journal of the American Chemical Society · 2019
    Article
  13. Review
  14. Article
  15. Article
  16. Article
  17. Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Ying ZhouNew England Biolabs, Inc, 240 County Road, Ipswich, MA 01938, USA.
Haruichi Asahara
Eric A Gaucher
Shaorong Chong

Funding

In vitro Reconstitution of Protein Translation of Thermus Thermophilus for DirectR44GM086930 · NIGMS · NEW ENGLAND BIOLABS, INC. · PI CHONG, SHAORONG · 2012 to 2013
$960k
In vitro Reconstitution of Protein Translation of Thermus Thermophilus for DirectR43GM086930 · NIGMS · NEW ENGLAND BIOLABS, INC. · PI CHONG, SHAORONG, ZHENG, YU · 2009 to 2009
$233k
NIGMS NIH HHS GM086930-01NIGMS NIH HHS R44 GM086930
6 · The paper itself

Abstract

Thermus thermophilus is a thermophilic model organism distantly related to the mesophilic model organism E. coli. We reconstituted protein translation of Thermus thermophilus in vitro from purified ribosomes, transfer ribonucleic acids (tRNAs) and 33 recombinant proteins. This reconstituted system was fully functional, capable of translating natural messenger RNA (mRNA) into active full-length proteins at temperatures up to 65°C and with yields up to 60 μg/ml. Surprisingly, the synthesis of active proteins also occurred at 37°C, a temperature well below the minimal growth temperature for T. thermophilus. A polyamine was required, with tetraamine being most effective, for translation at both high and low temperatures. Using such a defined in vitro system, we demonstrated a minimal set of components that are sufficient for synthesizing active proteins at high temperatures, the functional compatibility of key translation components between T. thermophilus and E. coli, and the functional conservation of a number of resurrected ancient elongation factors. This work sets the stage for future experiments that apply abundant structural information to biochemical characterization of protein translation and folding in T. thermophilus. Because it contains significantly reduced nucleases and proteases, this reconstituted thermostable cell-free protein synthesis system may enable in vitro engineering of proteins with improved thermostability.

Indexed as

Evolution, MolecularHot TemperatureProtein BiosynthesisBacterial ProteinsCell-Free SystemEscherichia coliPeptide Elongation FactorsPolyaminesRibosomal ProteinsThermus thermophilusBacterial ProteinsPeptide Elongation FactorsPolyaminesRibosomal Proteins

Identifiers

PMID22723376
PMCPMC3439929

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.