Evidence map›Paper›PMID 22723200›Full record

ArticleJournal of applied genetics2012

PRNP and SPRN genes polymorphism in atypical bovine spongiform encephalopathy cases diagnosed in Polish cattle.

Artur Gurgul, Mirosław Paweł Polak, Magdalena Larska, Ewa Słota

Abstract read
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In one paragraph

Article in Journal of applied genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 30 citations in OpenAlex.

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  6. The First Genetic Characterization of theAnimals : an open access journal from MDPI · 2024
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  11. The First Report of Genetic Polymorphisms of the EquineAnimals : an open access journal from MDPI · 2021
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  12. Review
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  15. Article
  16. Article
  17. Article
  18. Genetics of Prion Disease in Cattle.Bioinformatics and biology insights · 2015
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 3 institutions in 1 country.

Artur GurgulLaboratory of Genomics, National Research Institute of Animal Production, Krakowska 1, 32-083 Balice n. Krakow, Poland. agurgul@izoo.krakow.pl
Mirosław Paweł Polak
Magdalena Larska
Ewa Słota
National Veterinary Research Institute · PLNational Research Institute of Animal Production · PLRzeszów University · PL

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Polymorphisms in the coding region of the prion protein gene (PRNP) have been associated with the susceptibility and incubation period of prion diseases in humans and sheep. However, polymorphisms in this part of the bovine PRNP gene do not affect the classical bovine spongiform encephalopathy (BSE) susceptibility in cattle. Studies carried out in Germany have shown that insertion/deletion-type polymorphisms located in the promoter region of the bovine prion gene are possible genetic factors modulating BSE susceptibility by changing the level of PRNP expression. No such association was observed for atypical BSE cases; however, due to the rare nature of the disease, these results should be confirmed. Additionally, a single nonsynonymous mutation in PRNP codon 211 (E211K) was described in one H-type BSE case in the USA; however, it was not found in any other cases. Here, we performed genetic characterization of PRNP promoter indel variations and determined the polymorphism of open reading frames (ORFs) of PRNP and bovine prion-like Shadoo (SPRN) genes in six Polish atypical BSE cases and compared these results to the population of clinically healthy Polish Holstein cattle. No potentially pathogenic mutations were found in the PRNP ORF in atypical BSE-affected cattle, but our study showed a high frequency of deletions at the indel loci of PRNP promoter in these animals. Additionally, a rare sequence variation in the SPRN protein-coding sequence was found in one L-type atypical BSE-affected animal.

Indexed as

Genetic Predisposition to DiseasePolymorphism, GeneticAllelesAmino Acid SequenceAnimalsCattleEncephalopathy, Bovine SpongiformGene FrequencyHydrophobic and Hydrophilic InteractionsINDEL MutationMolecular Sequence DataNerve Tissue ProteinsOpen Reading FramesPolandPolymerase Chain ReactionPrionsNerve Tissue ProteinsPrions

Identifiers

PMID22723200
OpenAlexW2041568624

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.