Evidence map›Paper›PMID 22722992›Full record

ArticleMolecular biology reports2012

Isolation and characterization of two ABRE-binding proteins: EABF and EABF1 from the oil palm.

Vahid Omidvar, Siti Nor Akmar Abdullah, Chai Ling Ho, Maziah Mahmood, Ahmed Bakhit Al-Shanfari

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Article in Molecular biology reports, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 7 citations in OpenAlex.

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4 · The record

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5 · Who and what money

Authors and funding

5 authors at 1 institution in 1 country.

Vahid OmidvarDepartment of Agriculture Technology, Faculty of Agriculture, University Putra Malaysia, UPM, 43400 Selangor, Malaysia.
Siti Nor Akmar Abdullah
Chai Ling Ho
Maziah Mahmood
Ahmed Bakhit Al-Shanfari
Universiti Putra Malaysia · MY

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Abscisic acid (ABA) is an important phytohormone involved in the abiotic stress resistance in plants. The ABA-responsive element (ABRE) binding factors play significant roles in the plant development and response to abiotic stresses, but none so far have been isolated and characterized from the oil palm. Two ABA-responsive cDNA clones, named EABF and EABF1, were isolated from the oil palm fruits using yeast one-hybrid system. The EABF had a conserved AP2/EREBP DNA-binding domain (DNA-BD) and a potential nuclear localization sequence (NLS). No previously known DNA-BD was identified from the EABF1 sequence. The EABF and EABF1 proteins were classified as DREB/CBF and bZIP family members based on the multiple sequence alignment and phylogenetic analysis. Both proteins showed ABRE-binding and transcriptional activation properties in yeast. Furthermore, both proteins were able to trans-activate the down-stream expression of the LacZ reporter gene in yeast. An electrophoretic mobility shift assay revealed that in addition to the ABRE sequence, both proteins could bind to the DRE sequence as well. Transcriptional analysis revealed that the expression of EABF was induced in response to the ABA in the oil palm fruits and leaves, but not in roots, while the EABF1 was constitutively induced in all tissues. The expressions of both genes were strongly induced in fruits in response to the ABA, ethylene, methyl jasmonate, drought, cold and high-salinity treatments, indicating that the EABF and EABF1 might act as connectors among different stress signal transduction pathways. Our results indicate that the EABF and EABF1 are novel stress-responsive transcription factors, which are involved in the abiotic stress response and ABA signaling in the oil palm and could be used for production of stress-tolerant transgenic crops.

Indexed as

Amino Acid SequenceArecaceaeCloning, MolecularDNA-Binding ProteinsDNA, ComplementaryGene Expression Regulation, PlantMolecular Sequence DataPhylogenyPlant ProteinsResponse ElementsSequence AlignmentStress, PhysiologicalTrans-ActivatorsTranscription FactorsTranscription, GeneticTwo-Hybrid System TechniquesDNA-Binding ProteinsDNA, ComplementaryPlant ProteinsTrans-ActivatorsTranscription Factors

Identifiers

PMID22722992
OpenAlexW2066772210

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.