Evidence map›Paper›PMID 22722940›Full record

ArticleThe Journal of biological chemistry2012

Peptide-specific transfer of N-acetylgalactosamine to O-linked glycans by the glycosyltransferases β1,4-N-acetylgalactosaminyl transferase 3 (β4GalNAc-T3) and β4GalNAc-T4.

Dorothy Fiete, Mary Beranek, Jacques U Baenziger

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 10 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
10citing papers in PubMed, 1 pooled it
1.3field-weighted citation impact, top 21% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

10 citing papers in PubMed, 1 synthesis or guideline pooled it, 19 citations in OpenAlex.

  1. Pooled it
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  4. Review
  5. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

Dorothy FieteDepartment of Pathology, Washington University School of Medicine, St. Louis, Missouri 63110, USA.
Mary Beranek
Jacques U Baenziger
Washington University in St. Louis · US

Funding

OLIGOSACCHARIDE STRUCTURE & FUNCTION IN RECOGNITIONR01CA021923 · NCI · WASHINGTON UNIVERSITY · PI BAENZIGER, JACQUES U · 1985 to 2012
$3.2M
GLYCOPROTEIN HORMONE OLIGOSACCHARIDESR01HD058474 · NICHD · WASHINGTON UNIVERSITY · PI BAENZIGER, JACQUES U · 2009 to 2010
$1.2M
NCI NIH HHS R01 CA021923NCI NIH HHS R01-CA21923NICHD NIH HHS R01 HD058474NICHD NIH HHS R01-HD058474
6 · The paper itself

Abstract

N- and O-linked oligosaccharides on pro-opiomelanocortin both bear the unique terminal sequence SO(4)-4-GalNAcβ1,4GlcNAcβ. We previously demonstrated that protein-specific transfer of GalNAc to N-linked oligosaccharides on glycoprotein substrates is dependent on the presence of both an oligosaccharide acceptor and a peptide recognition motif consisting of a cluster of basic amino acids. We characterized how two β1,4-N-acetylgalactosaminyltransferases, β4GalNAc-T3 and β4GalNAc-T4, require the presence of both the peptide recognition motif and the N-linked oligosaccharide acceptors to transfer GalNAc in β1,4-linkage to GlcNAc in vivo and in vitro. We now show that β4GalNAc-T3 and β4GalNAc-T4 are able to utilize the same peptide motif to selectively add GalNAc to β1,6-linked GlcNAc in core 2 O-linked oligosaccharide structures to form Galβ1,3(GalNAcβ1,4GlcNAcβ1,6)GalNAcαSer/Thr. The β1,4-linked GalNAc can be further modified with 4-linked sulfate by either GalNAc-4-sulfotransferase 1 (GalNAc-4-ST1) (CHST8) or GalNAc-4-ST2 (CHST9) or with α2,6-linked N-acetylneuraminic acid by α2,6-sialyltransferase 1 (ST6Gal1), thus generating a family of unique GalNAcβ1,4GlcNAcβ (LacdiNAc)-containing structures on specific glycoproteins.

Indexed as

AcetylglucosamineAnimalsAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseCHO CellsCricetinaeCricetulusGlycoproteinsGlycosylationHEK293 CellsHumansMiceN-AcetylgalactosaminyltransferasesPeptidesSialyltransferasesSulfotransferasesAcetylglucosamineAntigens, CDbeta-D-Galactoside alpha 2-6-SialyltransferaseCHST9 protein, humanGlycoproteinsN-AcetylgalactosaminyltransferasesPeptidesSialyltransferasesST6GAL1 protein, humanSulfotransferases

Identifiers

PMID22722940
PMCPMC3436546
OpenAlexW1978195298

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.