Evidence map›Paper›PMID 22719885›Full record

ArticlePloS one2012

Ribonuclease E modulation of the bacterial SOS response.

Robert Manasherob, Christine Miller, Kwang-sun Kim, Stanley N Cohen

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 9 papers.

0numbers the graph read from it
0cells of the map it votes in
9citing papers in PubMed
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

9 citing papers in PubMed, 23 citations in OpenAlex.

  1. Article
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  6. Mechanism of HmBio · 2017
    Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors at 2 institutions in 2 countries.

Robert ManasherobDepartment of Genetics, Stanford University School of Medicine, Stanford, California, United States of America.
Christine Miller
Kwang-sun Kim
Stanley N Cohen
Stanford University · USKorea Research Institute of Bioscience and Biotechnology · KR

Funding

Mechanisms of Antibiotic Resistance in BacteriaR01AI008619 · NIAID · STANFORD UNIVERSITY · PI COHEN, STANLEY N · 1985 to 2011
$5.3M
POLYADENYLATION OF RNA IN BACTERIAR01GM054158 · NIGMS · STANFORD UNIVERSITY · PI COHEN, STANLEY N · 1996 to 2006
$1.5M
GENETIC MECHANISMS IN BACTERIAL ANTIBIOTIC RESISTANCER37AI008619 · NIAID · STANFORD UNIVERSITY · PI COHEN, STANLEY N · 1986 to 1995
–
NIAID NIH HHS AI08619NIAID NIH HHS R01 AI008619NIGMS NIH HHS GM54158NIGMS NIH HHS R01 GM054158
6 · The paper itself

Abstract

Plants, animals, bacteria, and Archaea all have evolved mechanisms to cope with environmental or cellular stress. Bacterial cells respond to the stress of DNA damage by activation of the SOS response, the canonical RecA/LexA-dependent signal transduction pathway that transcriptionally derepresses a multiplicity of genes-leading to transient arrest of cell division and initiation of DNA repair. Here we report the previously unsuspected role of E. coli endoribonuclease RNase E in regulation of the SOS response. We show that RNase E deletion or inactivation of temperature-sensitive RNase E protein precludes normal initiation of SOS. The ability of RNase E to regulate SOS is dynamic, as down regulation of RNase E following DNA damage by mitomycin C resulted in SOS termination and restoration of RNase E function leads to resumption of a previously aborted response. Overexpression of the RraA protein, which binds to the C-terminal region of RNase E and modulates the actions of degradosomes, recapitulated the effects of RNase E deficiency. Possible mechanisms for RNase E effects on SOS are discussed.

Indexed as

SOS Response, GeneticsBacteriaBacterial ProteinsBase SequenceDNA, BacterialDNA DamageEndoribonucleasesFlow CytometryBacterial ProteinsDNA, BacterialEndoribonucleasesribonuclease E

Identifiers

PMID22719885
PMCPMC3374874
OpenAlexW2119534200

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.