Evidence map›Paper›PMID 22719251›Full record

ArticlePLoS pathogens2012

Crystal structures reveal the multi-ligand binding mechanism of Staphylococcus aureus ClfB.

Hua Xiang, Yue Feng, Jiawei Wang, Bao Liu, Yeguang Chen, Lei Liu, Xuming Deng, Maojun Yang

Open access · goldAbstract read
In one paragraph

Article in PLoS pathogens, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 38 papers.

0numbers the graph read from it
0cells of the map it votes in
38citing papers in PubMed
2.1field-weighted citation impact, top 14% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

38 citing papers in PubMed, 61 citations in OpenAlex.

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  8. Mechanical Stabilization of a Bacterial Adhesion Complex.Journal of the American Chemical Society · 2022
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  10. Colonization and Infection of Indwelling Medical Devices byInternational journal of molecular sciences · 2022
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  17. Review
  18. Review
  19. Surface Proteins ofMicrobiology spectrum · 2019
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors at 4 institutions in 2 countries.

Hua XiangKey Laboratory for Protein Sciences of Ministry of Education, Tsinghua-Peking Center for Life Sciences, School of Life Sciences, Tsinghua University, Beijing, China.
Yue Feng
Jiawei Wang
Bao Liu
Yeguang Chen
Lei Liu
Xuming Deng
Maojun Yang
Tsinghua University · CNCenter for Life Sciences · CNChinese Academy of Medical Sciences & Peking Union Medical College · CNJilin University · CN

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Staphylococcus aureus (S. aureus) pathogenesis is a complex process involving a diverse array of extracellular and cell wall components. ClfB, an MSCRAMM (Microbial Surface Components Recognizing Adhesive Matrix Molecules) family surface protein, described as a fibrinogen-binding clumping factor, is a key determinant of S. aureus nasal colonization, but the molecular basis for ClfB-ligand recognition remains unknown. In this study, we solved the crystal structures of apo-ClfB and its complexes with fibrinogen α (Fg α) and cytokeratin 10 (CK10) peptides. Structural comparison revealed a conserved glycine-serine-rich (GSR) ClfB binding motif (GSSGXGXXG) within the ligands, which was also found in other human proteins such as Engrailed protein, TCF20 and Dermokine proteins. Interaction between Dermokine and ClfB was confirmed by subsequent binding assays. The crystal structure of ClfB complexed with a 15-residue peptide derived from Dermokine revealed the same peptide binding mode of ClfB as identified in the crystal structures of ClfB-Fg α and ClfB-CK10. The results presented here highlight the multi-ligand binding property of ClfB, which is very distinct from other characterized MSCRAMMs to-date. The adherence of multiple peptides carrying the GSR motif into the same pocket in ClfB is reminiscent of MHC molecules. Our results provide a template for the identification of other molecules targeted by S. aureus during its colonization and infection. We propose that other MSCRAMMs like ClfA and SdrG also possess multi-ligand binding properties.

Indexed as

Adhesins, BacterialAmino Acid SequenceBacterial ProteinsConserved SequenceCrystallizationHumansIntercellular Signaling Peptides and ProteinsLigandsMolecular Sequence DataProtein BindingProtein Interaction Domains and MotifsProteinsProtein Structure, QuaternaryStaphylococcus aureusSurface Plasmon ResonanceTranscription FactorsAdhesins, BacterialBacterial ProteinsclfB protein, Staphylococcus aureusDMKN protein, humanIntercellular Signaling Peptides and ProteinsLigandsProteinsTCF20 protein, humanTranscription Factors

Identifiers

PMID22719251
PMCPMC3375286
OpenAlexW2068714412

What OpenQuestion holds

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LicenceCC BY
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.