Evidence map›Paper›PMID 22718278›Full record

Trial reportThe Prostate2013

A novel germline mutation in HOXB13 is associated with prostate cancer risk in Chinese men.

Xiaoling Lin, Lianxi Qu, Zhuo Chen, Chuanliang Xu, Dingwei Ye, Qiang Shao, Xiang Wang, Jun Qi, Zhiwen Chen, Fangjian Zhou and 32 more

Open access · bronzeAbstract readMulticenter StudyRandomized Controlled Trial
In one paragraph

Trial report in The Prostate, 2013. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 55 papers, 2 of them syntheses that pooled it.

0numbers the graph read from it
0cells of the map it votes in
55citing papers in PubMed, 2 pooled it
5.2field-weighted citation impact, top 4% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

55 citing papers in PubMed, 2 syntheses or guidelines pooled it, 79 citations in OpenAlex.

  1. Pooled it
  2. G84E mutation in HOXB13 is firmly associated with prostate cancer risk: a meta-analysis.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2014
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  10. Clinicopathological Characteristics and Mutational Landscape ofCurrent issues in molecular biology · 2023
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

42 authors at 20 institutions in 2 countries.

Xiaoling LinFudan-VARI Center for Genetic Epidemiology, School of Life Sciences, Fudan University, Shanghai, PR China.
Lianxi Qu
Zhuo Chen
Chuanliang Xu
Dingwei Ye
Qiang Shao
Xiang Wang
Jun Qi
Zhiwen Chen
Fangjian Zhou
Meilin Wang
Zhong Wang
Dalin He
Denglong Wu
Xin Gao
Jianlin Yuan
Gongxian Wang
Yong Xu
Guozeng Wang
Pei Dong
Yang Jiao
Jin Yang
Jun Ou-Yang
Haowen Jiang
Yao Zhu
Shancheng Ren
Zhengdong Zhang
Changjun Yin
Qijun Wu
Ying Zheng
Aubrey R Turner
Sha Tao
Rong Na
Qiang Ding
Daru Lu
Rong Shi
Jielin Sun
Fang Liu
S Lilly Zheng
Zengnan Mo
Yinghao Sun
Jianfeng Xu
Wake Forest University · USFudan University · CNHuashan Hospital · CNChanghai Hospital · CNFudan University Shanghai Cancer Center · CNNanjing Medical University · CNSecond Military Medical University · CNXinHua Hospital · CNArmy Medical University · CNFirst Affiliated Hospital of Xi'an Jiaotong University · CNGuangxi Medical University · CNJiangsu Province Hospital · CNNanchang University · CNShanghai Jiao Tong University · CNShanghai Municipal Center For Disease Control Prevention · CNShanghai Ninth People's Hospital · CNSouthwest Hospital · CNState Key Laboratory of Genetic EngineeringState Key Laboratory of Oncogene and Related Genes · CNSun Yat-sen University · CN

Funding

Confirmation of SNPs Associated with Aggressive PCa in a GWA StudyR01CA129684 · NCI · WAKE FOREST UNIVERSITY HEALTH SCIENCES · PI XU, JIANFENG · 2008 to 2011
$2.4M
NCI NIH HHS CA129684NCI NIH HHS R01 CA129684
6 · The paper itself

Abstract

backgroundA rare mutation G84E in HOXB13 was recently identified to be associated with prostate cancer (PCa) in Caucasians. The goal of this study is to test association between HOXB13 genetic variants and PCa risk in Chinese men.

methodsAll study subjects were part of the Chinese Consortium for Prostate Cancer Genetics (ChinaPCa). In the first stage, we screened for mutations by sequencing the HOXB13 coding region in 96 unrelated PCa patients. In stage 2, G84E and novel mutations found in stage 1 were genotyped in 671 PCa patients and 1,536 controls. In stage 3, mutation status in 751 additional PCa patients was imputed via haplotype.

resultsThe G84E mutation was not detected in this study. However, a novel mutation, G135E, was identified among 96 patients in stage 1. It was also observed twice in 575 additional PCa patients but not in 1,536 control subjects of stage 2. The frequency of G135E was significantly different between cases and controls, with a P-value of 0.027, based on Fisher's exact test. Haplotype estimation showed that G135E mutation carriers shared a unique haplotype that was not observed in other subjects. In stage 3, two more PCa patients were predicted to carry the G135E mutation.

conclusionsWe identified a novel rare mutation in the HOXB13 gene, G135E, which appears to be a founder mutation. This mutation is associated with increased PCa risk in Chinese men. Consistent with a previous report, our findings provide further evidence that rare mutations in HOXB13 contribute to PCa risk.

Indexed as

AgedAged, 80 and overAmino Acid SubstitutionAsian PeopleChinaGenetic Predisposition to DiseaseGerm-Line MutationGlutamic AcidGlycineHomeodomain ProteinsHumansMaleMiddle AgedProstatic NeoplasmsGlutamic AcidGlycineHomeodomain ProteinsHOXB13 protein, human

Identifiers

PMID22718278
PMCPMC3755486
OpenAlexW2047936642

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.