Evidence map›Paper›PMID 22716292›Full record

ArticleThe Biochemical journal2012

Foxk1 recruits the Sds3 complex and represses gene expression in myogenic progenitors.

Xiaozhong Shi, David C Seldin, Daniel J Garry

Open access · greenAbstract read
In one paragraph

Article in The Biochemical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 28 papers.

0numbers the graph read from it
0cells of the map it votes in
28citing papers in PubMed
1.6field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

28 citing papers in PubMed, 45 citations in OpenAlex.

  1. Review
  2. Article
  3. Article
  4. Review
  5. SDS3 regulates microglial inflammation by modulating the expression of the upstream kinase ASK1 in the p38 MAPK signaling pathway.Inflammation research : official journal of the European Histamine Research Society ... [et al.] · 2024
    Article
  6. Article
  7. Review
  8. Article
  9. Article
  10. Article
  11. Article
  12. Review
  13. Foxk1 regulates cancer progression.Annals of translational medicine · 2020
    Article
  14. Article
  15. Article
  16. Protein kinase CK2 subunits exert specific and coordinated functions in skeletal muscle differentiation and fusogenic activity.FASEB journal : official publication of the Federation of American Societies for Experimental Biology · 2019
    Article
  17. Impact of Colon-Specific DNA Methylation-Regulated Gene Modules on Colorectal Cancer Patient Survival.Medical science monitor : international medical journal of experimental and clinical research · 2019
    Article
  18. Article
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors at 2 institutions in 1 country.

Xiaozhong ShiLillehei Heart Institute, University of Minnesota-Twin Cities, Minneapolis, MN 55455, USA.
David C Seldin
Daniel J Garry
Twin Cities Orthopedics · USBoston University · US

Funding

MNF Regulation of Myogenic Stem CellsR01AR047850 · NIAMS · UNIVERSITY OF TEXAS SW MED CTR/DALLAS · PI GARRY, DANIEL J. · 2001 to 2011
$3.3M
Transcriptional Regulation of Myogenic Stem CellsR01AR055906 · NIAMS · UNIVERSITY OF MINNESOTA · PI GARRY, DANIEL J. · 2009 to 2013
$1.6M
NIAMS NIH HHS 5R01AR047850NIAMS NIH HHS 5R01AR055906NIAMS NIH HHS R01 AR047850NIAMS NIH HHS R01 AR055906
6 · The paper itself

Abstract

Previous studies have established that Foxk1 (forkhead box k1) plays an important role in skeletal muscle regeneration. Foxk1 regulates the cell-cycle progression of myogenic progenitors by repressing the cell-cycle inhibitor gene p21. However, the underlying mechanism is not well understood. In the present study, we report the identification of Sds3 (suppressor of defective silencing 3) as an adaptor protein that recruits the Sin3 [SWI (switch)-independent 3]-HDAC (histone deacetylase) repression complex and binds Foxk1. Using GST (glutathione transferase) pull-down assays, we defined the interaction between the Foxk1 FHA (forkhead-associated domain) domain and phospho-Thr(49) in Sds3. We demonstrated that the transcriptional repression of Foxk1 is dependent on the Sin3-Sds3 repression complex, and knockdown of Sds3 results in cell-cycle arrest. We further identified the protein kinase CK2 as the protein kinase for Sds3 Thr(49) and demonstrated that the protein kinase activity of CK2 is required for proper cell-cycle progression. Analysis of CK2 mutant mice reveals perturbation of skeletal muscle regeneration due to the dysregulation of cell-cycle kinetics. Overall, these studies define a CK2-Sds3-Foxk1 cascade that modulates gene expression and regulates skeletal muscle regeneration.

Indexed as

Gene ExpressionAnimalsBinding SitesCell DivisionForkhead Transcription FactorsGenes, cdcMiceMuscle, SkeletalRepressor ProteinsStem CellsForkhead Transcription FactorsFoxk1 protein, mouseRepressor ProteinsSds3 protein, mouse

Identifiers

PMID22716292
PMCPMC4494662
OpenAlexW2000375368

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.