Evidence map›Paper›PMID 22714822›Full record

ArticleOrganic & biomolecular chemistry2012

Axial and equatorial ligand effects on biomimetic cysteine dioxygenase model complexes.

Luis E Gonzalez-Ovalle, Matthew G Quesne, Devesh Kumar, David P Goldberg, Sam P de Visser

Abstract read
In one paragraph

Article in Organic & biomolecular chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 8 papers.

0numbers the graph read from it
0cells of the map it votes in
8citing papers in PubMed
0.9field-weighted citation impact, top 25% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

8 citing papers in PubMed, 16 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 3 countries.

Luis E Gonzalez-OvalleManchester Interdisciplinary Biocenter and School of Chemical Engineering and Analytical Science, The University of Manchester, 131 Princess Street, Manchester M1 7DN, UK.
Matthew G Quesne
Devesh Kumar
David P Goldberg
Sam P de Visser
University of Manchester · GBBabasaheb Bhimrao Ambedkar University · INJohns Hopkins University · US

Funding

Synthetic Models of N/S-Ligated Metal Centers in BiologyR01GM062309 · NIGMS · JOHNS HOPKINS UNIVERSITY · PI GOLDBERG, DAVID P · 2001 to 2010
$2.2M
Biotechnology and Biological Sciences Research CouncilNIGMS NIH HHS GM62309NIGMS NIH HHS R01 GM062309
6 · The paper itself

Abstract

Density functional theory (DFT) calculations are presented on biomimetic model complexes of cysteine dioxygenase and focus on the effect of axial and equatorial ligand placement. Recent studies by one of us [Y. M. Badiei, M. A. Siegler and D. P. Goldberg, J. Am. Chem. Soc. 2011, 133, 1274] gave evidence of a nonheme iron biomimetic model of cysteine dioxygenase using an i-propyl-bis(imino)pyridine, equatorial tridentate ligand. Addition of thiophenol, an anion - either chloride or triflate - and molecular oxygen, led to several possible stereoisomers of this cysteine dioxygenase biomimetic complex. Moreover, large differences in reactivity using chloride as compared to triflate as the binding anion were observed. Here we present a series of DFT calculations on the origin of these reactivity differences and show that it is caused by the preference of coordination site of anion versus thiophenol binding to the chemical system. Thus, stereochemical interactions of triflate and the bulky iso-propyl substituents of the ligand prevent binding of thiophenol in the trans position using triflate. By contrast, smaller anions, such as chloride, can bind in either cis or trans ligand positions and give isomers with similar stability. Our calculations help to explain the observance of thiophenol dioxygenation by this biomimetic system and gives details of the reactivity differences of ligated chloride versus triflate.

Indexed as

Biomimetic MaterialsCatalytic DomainCysteine DioxygenaseIron CompoundsLigandsModels, MolecularOxygenPhenolsPyridinesQuantum TheoryStereoisomerismSulfhydryl CompoundsCysteine DioxygenaseIron CompoundsLigandsOxygenPhenolsPyridinesSulfhydryl Compoundsthiophenol

Identifiers

PMID22714822
PMCPMC3454459
OpenAlexW2102094595

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.