Evidence map›Paper›PMID 22714409›Full record

ArticleGenetics2012

Activity-dependent A-to-I RNA editing in rat cortical neurons.

Neville E Sanjana, Erez Y Levanon, Emily A Hueske, Jessica M Ambrose, Jin Billy Li

Open access · bronzeAbstract read
In one paragraph

Article in Genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 30 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
30citing papers in PubMed, 1 pooled it
2.4field-weighted citation impact, top 11% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

30 citing papers in PubMed, 1 synthesis or guideline pooled it, 39 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Review
  4. Review
  5. Review
  6. Article
  7. Article
  8. Article
  9. Article
  10. Article
  11. Review
  12. R/G editing in GluA2RScientific reports · 2017
    Article
  13. Article
  14. Interfacing Neural Network Components and Nucleic Acids.Frontiers in bioengineering and biotechnology · 2017
    Review
  15. Article
  16. Article
  17. Review
  18. Epigenetics in NG2 glia cells.Brain research · 2016
    Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 4 institutions in 2 countries.

Neville E SanjanaBroad Institute, Cambridge, Massachusetts 02142, USA. neville@broadinstitute.org
Erez Y Levanon
Emily A Hueske
Jessica M Ambrose
Jin Billy Li
Institute of Cognitive and Brain Sciences · USBar-Ilan University · ILMassachusetts Institute of Technology · USStanford University · US

Funding

Howard Hughes Medical Institute
6 · The paper itself

Abstract

Changes in neural activity influence synaptic plasticity/scaling, gene expression, and epigenetic modifications. We present the first evidence that short-term and persistent changes in neural activity can alter adenosine-to-inosine (A-to-I) RNA editing, a post-transcriptional site-specific modification found in several neuron-specific transcripts. In rat cortical neuron cultures, activity-dependent changes in A-to-I RNA editing in coding exons are present after 6 hr of high potassium depolarization but not after 1 hr and require calcium entry into neurons. When treatments are extended from hours to days, we observe a negative feedback phenomenon: Chronic depolarization increases editing at many sites and chronic silencing decreases editing. We present several different modulations of neural activity that change the expression of different mRNA isoforms through editing.

Indexed as

RNA EditingAdenosineAnimalsCalciumCerebral CortexInosineMembrane PotentialsNeuronsRatsRNA, MessengerSynapsesTime FactorsAdenosineCalciumInosineRNA, Messenger

Identifiers

PMID22714409
PMCPMC3430542
OpenAlexW2166229429

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.