Evidence map›Paper›PMID 22713585›Full record

ArticleBiophysical journal2012

Microscopic origin of gating current fluctuations in a potassium channel voltage sensor.

J Alfredo Freites, Eric V Schow, Stephen H White, Douglas J Tobias

Abstract read
In one paragraph

Article in Biophysical journal, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 15 papers.

0numbers the graph read from it
0cells of the map it votes in
15citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

15 citing papers in PubMed.

  1. Article
  2. Article
  3. Fifty years of gating currents and channel gating.The Journal of general physiology · 2023
    Review
  4. Mechanism of voltage gating in the voltage-sensing phosphatase Ci-VSP.Proceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  5. Voltage-dependent structural models of the human Hv1 proton channel from long-timescale molecular dynamics simulations.Proceedings of the National Academy of Sciences of the United States of America · 2020
    Article
  6. Article
  7. Article
  8. Essay on Biomembrane Structure.The Journal of membrane biology · 2019
    Review
  9. Small molecule modulation of voltage gated sodium channels.Current opinion in structural biology · 2017
    Review
  10. Article
  11. Review
  12. Article
  13. Article
  14. Dynamics of internal pore opening in K(V) channels probed by a fluorescent unnatural amino acid.Proceedings of the National Academy of Sciences of the United States of America · 2013
    Article
  15. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J Alfredo FreitesDepartment of Chemistry, University of California, Irvine, California, USA.
Eric V Schow
Stephen H White
Douglas J Tobias

Funding

Project 3: Structural Studies of Voltage-Gated Potassium Channels as FunctionP01GM086685 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WORCESTER, DAVID · 2009 to 2013
$6.7M
Membrane Protein Folding and AssemblyR01GM074637 · NIGMS · UNIVERSITY OF CALIFORNIA-IRVINE · PI WHITE, STEPHEN H. · 2006 to 2020
$4.5M
Innovative Supercomputing for Breakthrough Molecular DynamicsRC2GM093307 · NIGMS · CARNEGIE-MELLON UNIVERSITY · PI DITTRICH, MARKUS · 2009 to 2010
$2.7M
NIGMS NIH HHS GM74637NIGMS NIH HHS GM86685NIGMS NIH HHS P01 GM086685NIGMS NIH HHS R01 GM074637NIGMS NIH HHS RC2 GM093307NIGMS NIH HHS RC2GM093307
6 · The paper itself

Abstract

Voltage-dependent ion channels open and close in response to changes in membrane electrical potential due to the motion of their voltage-sensing domains (VSDs). VSD charge displacements within the membrane electric field are observed in electrophysiology experiments as gating currents preceding ionic conduction. The elementary charge motions that give rise to the gating current cannot be observed directly, but appear as discrete current pulses that generate fluctuations in gating current measurements. Here we report direct observation of gating-charge displacements in an atomistic molecular dynamics simulation of the isolated VSD from the KvAP channel in a hydrated lipid bilayer on the timescale (10-μs) expected for elementary gating charge transitions. The results reveal that gating-charge displacements are associated with the water-catalyzed rearrangement of salt bridges between the S4 arginines and a set of conserved acidic side chains on the S1-S3 transmembrane segments in the hydrated interior of the VSD.

Indexed as

MicroscopyAeropyrumArchaeal ProteinsIon Channel GatingMembrane PotentialsPotassium ChannelsProtein Structure, TertiaryArchaeal ProteinsPotassium Channels

Identifiers

PMID22713585
PMCPMC3368149

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.