Evidence map›Paper›PMID 22712434›Full record

ArticleBMC medical genetics2012

Analysis of Xq27-28 linkage in the international consortium for prostate cancer genetics (ICPCG) families.

Joan E Bailey-Wilson, Erica J Childs, Cheryl D Cropp, Daniel J Schaid, Jianfeng Xu, Nicola J Camp, Lisa A Cannon-Albright, James M Farnham, Asha George, Isaac Powell and 43 more

Registry-linked trialOpen access · goldAbstract read
In one paragraph

Article in BMC medical genetics, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It is linked to trial NCT01221168 (ProGene), which is not on this map. Cited by 3 papers.

0numbers the graph read from it
0cells of the map it votes in
3citing papers in PubMed
0.8field-weighted citation impact, top 23% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

NCT01221168 recruitingnot on this map

ProGene: Etude Genetique et Epidemiologique du Cancer de la Prostate Familial

TypeobservationalSponsorCentre de Recherche sur les Pathologies ProstatiquesRan1996 to 2026Enrolled10,000ConditionsProstate Cancer
3 · Its place in the literature

Who cites it

3 citing papers in PubMed, 6 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

53 authors at 20 institutions in 9 countries.

Joan E Bailey-WilsonInherited Disease Research Branch, National Human Genome Research Institute, National Institutes of Health, Baltimore, MD 21224, USA. jebw@mail.nih.gov
Erica J Childs
Cheryl D Cropp
Daniel J Schaid
Jianfeng Xu
Nicola J Camp
Lisa A Cannon-Albright
James M Farnham
Asha George
Isaac Powell
John D Carpten
Graham G Giles
John L Hopper
Gianluca Severi
Dallas R English
William D Foulkes
Lovise Mæhle
Pål Møller
Rosalind Eeles
Douglas Easton
Michelle Guy
Steve Edwards
Michael D Badzioch
Alice S Whittemore
Ingrid Oakley-Girvan
Chih-Lin Hsieh
Latchezar Dimitrov
Janet L Stanford
Danielle M Karyadi
Kerry Deutsch
Laura McIntosh
Elaine A Ostrander
Kathleen E Wiley
Sarah D Isaacs
Patrick C Walsh
Stephen N Thibodeau
Shannon K McDonnell
Scott Hebbring
Ethan M Lange
Kathleen A Cooney
Teuvo L J Tammela
Johanna Schleutker
Christiane Maier
Sylvia Bochum
Josef Hoegel
Henrik Grönberg
Fredrik Wiklund
Monica Emanuelsson
Geraldine Cancel-Tassin
Antoine Valeri
Olivier Cussenot
William B Isaacs
International Consortium for Prostate Cancer Genetics
Agence France-Presse · FRMayo Clinic in Florida · USNational Human Genome Research Institute · USUniversität Ulm · DEUniversity of Melbourne · AUFoundation for Health Care Quality · USInstitute of Cancer Research · GBJohns Hopkins Bayview Medical Center · USJohns Hopkins University · USKarolinska Institutet · SEOslo University Hospital · NOStanford Medicine · USUniversity of Utah · USWake Forest University · USAnn Arbor Center for Independent Living · USCancer Council Victoria · AUCancer Research UK · GBFox Chase Cancer Center · USFred Hutch Cancer Center · USGeorge E. Wahlen Department of VA Medical Center · US

Funding

Translational Bioimaging Core Shared ResourceP30CA015704 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI Marian Esvelt · 1985 to 2026
$296.4M
UTAH REGIONAL CANCER CENTERP30CA042014 · NCI · UTAH STATE HIGHER EDUCATION SYSTEM--UNIVERSITY OF UTAH · PI Jared P Rutter · 1986 to 2026
$72.6M
Prostate Cancer Susceptibility: The ICPCG StudyU01CA089600 · NCI · MAYO CLINIC ROCHESTER · PI THIBODEAU, STEPHEN NORMAN · 2002 to 2016
$27.3M
VIRAL DAMAGE TO BRAIN AND NEUROMUSCULAR SYSTEMM01RR000064 · NCRR · UNIVERSITY OF UTAH · PI SWOBODA, KATHRYN J. · 1985 to 2008
$21.7M
Finding Genes for Human Prostate CancerZIAHG200325 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI OSTRANDER, ELAINE · 2009 to 2021
$17.7M
Genetic Epidemiology of CancerZIAHG200331 · NHGRI · NATIONAL HUMAN GENOME RESEARCH INSTITUTE · PI BAILEY-WILSON, JOAN ELLEN · 2009 to 2022
$11.7M
Interdisciplinary Tranining in Cancer ResearchT32CA080416 · NCI · UNIVERSITY OF WASHINGTON · PI STODDARD, BARRY L. · 1998 to 2023
$9.7M
GENETIC EPIDEMIOLOGY OF PROSTATE CANCERR01CA080122 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI STANFORD, JANET L · 1999 to 2008
$3.8M
GENETICS OF PROSTATE CANCER SUSCEPTIBILITYR01CA078836 · NCI · FRED HUTCHINSON CANCER RESEARCH CENTER · PI NELSON, PETER S · 1999 to 2005
$3.3M
GENETIC ANALYSIS OF HEREDITARY PROSTATE CANCER FAMILIESR01CA079596 · NCI · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI COONEY, KATHLEEN A · 1999 to 2009
$3.0M
Mapping and Cloning Prostate Cancer Predisposition LociR01CA090752 · NCI · UNIVERSITY OF UTAH · PI ALBRIGHT, LISA CANNON · 2001 to 2004
$2.3M
LOCALIZATION OF SUSCEPTIBILITY LOCI IN PROSTATE CANCERR01CA072818 · NCI · MAYO CLINIC COLL OF MEDICINE, ROCHESTER · PI THIBODEAU, STEPHEN NORMAN · 1997 to 2005
$1.9M
Cancer Research UK 10588Cancer Research UK 15007Intramural NIH HHSNCI NIH HHS CA079596NCI NIH HHS CA106523NCI NIH HHS CA67044NCI NIH HHS CA72818NCI NIH HHS CA78836NCI NIH HHS CA80122NCI NIH HHS CA90752NCI NIH HHS CA95052NCI NIH HHS HHSN261201000026CNCI NIH HHS P30 CA015704NCI NIH HHS P30 CA042014NCI NIH HHS T32 CA080416NCI NIH HHS U01 CA89600NCRR NIH HHS M01-RR00064NHGRI NIH HHS N01-HG-65403
6 · The paper itself

Abstract

backgroundGenetic variants are likely to contribute to a portion of prostate cancer risk. Full elucidation of the genetic etiology of prostate cancer is difficult because of incomplete penetrance and genetic and phenotypic heterogeneity. Current evidence suggests that genetic linkage to prostate cancer has been found on several chromosomes including the X; however, identification of causative genes has been elusive.

methodsParametric and non-parametric linkage analyses were performed using 26 microsatellite markers in each of 11 groups of multiple-case prostate cancer families from the International Consortium for Prostate Cancer Genetics (ICPCG). Meta-analyses of the resultant family-specific linkage statistics across the entire 1,323 families and in several predefined subsets were then performed.

resultsMeta-analyses of linkage statistics resulted in a maximum parametric heterogeneity lod score (HLOD) of 1.28, and an allele-sharing lod score (LOD) of 2.0 in favor of linkage to Xq27-q28 at 138 cM. In subset analyses, families with average age at onset less than 65 years exhibited a maximum HLOD of 1.8 (at 138 cM) versus a maximum regional HLOD of only 0.32 in families with average age at onset of 65 years or older. Surprisingly, the subset of families with only 2-3 affected men and some evidence of male-to-male transmission of prostate cancer gave the strongest evidence of linkage to the region (HLOD = 3.24, 134 cM). For this subset, the HLOD was slightly increased (HLOD = 3.47 at 134 cM) when families used in the original published report of linkage to Xq27-28 were excluded.

conclusionsAlthough there was not strong support for linkage to the Xq27-28 region in the complete set of families, the subset of families with earlier age at onset exhibited more evidence of linkage than families with later onset of disease. A subset of families with 2-3 affected individuals and with some evidence of male to male disease transmission showed stronger linkage signals. Our results suggest that the genetic basis for prostate cancer in our families is much more complex than a single susceptibility locus on the X chromosome, and that future explorations of the Xq27-28 region should focus on the subset of families identified here with the strongest evidence of linkage to this region.

Indexed as

Chromosomes, Human, XAllelesGenetic LinkageGenome-Wide Association StudyHumansMaleMicrosatellite RepeatsProstatic Neoplasms

Identifiers

PMID22712434
PMCPMC3495053
OpenAlexW2142059780

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Registered trials

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.