Evidence map›Paper›PMID 22711543›Full record

ArticleCellular oncology (Dordrecht, Netherlands)2012

CSE1L, DIDO1 and RBM39 in colorectal adenoma to carcinoma progression.

Anke H Sillars-Hardebol, Beatriz Carvalho, Jeroen A M Beliën, Meike de Wit, Pien M Delis-van Diemen, Marianne Tijssen, Mark A van de Wiel, Fredrik Pontén, Gerrit A Meijer, Remond J A Fijneman

Open access · hybridAbstract read
In one paragraph

Article in Cellular oncology (Dordrecht, Netherlands), 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 24 papers.

0numbers the graph read from it
0cells of the map it votes in
24citing papers in PubMed
0.8field-weighted citation impact, top 29% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

24 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
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  8. Analysis and identification of mMolecular therapy. Nucleic acids · 2022
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  11. RNA Regulators in Leukemia and Lymphoma.Cold Spring Harbor perspectives in medicine · 2020
    Review
  12. Article
  13. Review
  14. Exome sequencing in 51 early onset non-familial CRC cases.Molecular genetics & genomic medicine · 2019
    Article
  15. Article
  16. Article
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  18. Article
  19. CAS (CSE1L) signaling pathway in tumor progression and its potential as a biomarker and target for targeted therapy.Tumour biology : the journal of the International Society for Oncodevelopmental Biology and Medicine · 2016
    Review
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

10 authors at 3 institutions in 3 countries.

Anke H Sillars-HardebolDepartment of Pathology, VU University Medical Center, Amsterdam, The Netherlands.
Beatriz Carvalho
Jeroen A M Beliën
Meike de Wit
Pien M Delis-van Diemen
Marianne Tijssen
Mark A van de Wiel
Fredrik Pontén
Gerrit A Meijer
Remond J A Fijneman
Amsterdam UMC Location VUmc · NLUniversity Medical Center · USUppsala University · SE

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundGain of chromosome 20q is an important factor in the progression from colorectal adenomas to carcinomas. Genes that drive 20q gain are expected to show correlation of mRNA and protein expression levels with 20q DNA copy number status while functionally influencing cancer processes. CSE1L, DIDO1 and RBM39 are located on the 20q amplicon and affect processes such as cell viability and anchorage-independent growth in colorectal cancer. This study aimed to investigate whether CSE1L, DIDO1 and RBM39 may drive 20q amplification.

methodsProtein expression levels were examined by immunohistochemical evaluation of tissue microarrays containing a series of colorectal adenoma and carcinoma samples, which were characterized by genome-wide (microarray-based) DNA and mRNA profiling.

resultsCSE1L, DIDO1 and RBM39 mRNA expression levels correlated with chromosome 20q DNA copy number status. CSE1L protein expression was not associated with 20q gain, although its expression was increased in carcinomas compared to adenomas. DIDO1 and RBM39 protein expression was quite strong in the majority of tumors irrespective of 20q DNA copy number status.

conclusionThe lack of correlation between protein expression levels and 20q DNA copy number status implies that CSE1L, DIDO1 and RBM39 are merely passengers rather than drivers of chromosome 20q gain in colorectal adenoma-to-carcinoma progression.

Indexed as

AdenomaCarcinomaCellular Apoptosis Susceptibility ProteinChromosome AberrationsChromosomes, Human, Pair 20Colorectal NeoplasmsDisease ProgressionDNA-Binding ProteinsGene Expression Regulation, NeoplasticHumansImmunohistochemistryNuclear ProteinsReverse Transcriptase Polymerase Chain ReactionRNA-Binding ProteinsRNA, MessengerTissue Array AnalysisCellular Apoptosis Susceptibility ProteinDIDO1 protein, humanDNA-Binding ProteinsHCC1 autoantigenNuclear ProteinsRNA-Binding ProteinsRNA, Messenger

Identifiers

PMID22711543
PMCPMC12994943
OpenAlexW2032765819

What OpenQuestion holds

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LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.