Evidence map›Paper›PMID 22708834›Full record

ReviewExpert opinion on drug discovery2012

Computational analysis of high-throughput flow cytometry data.

J Paul Robinson, Bartek Rajwa, Valery Patsekin, Vincent Jo Davisson

Abstract readReview
In one paragraph

Review in Expert opinion on drug discovery, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 22 papers.

0numbers the graph read from it
0cells of the map it votes in
22citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

22 citing papers in PubMed.

  1. Review
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Single-cell technologies in reproductive immunology.American journal of reproductive immunology (New York, N.Y. : 1989) · 2019
    Review
  8. Data-Driven Flow Cytometry Analysis.Methods in molecular biology (Clifton, N.J.) · 2019
    Review
  9. Article
  10. Of Cytometry, Stem Cells and Fountain of Youth.Stem cell reviews and reports · 2017
    Review
  11. Article
  12. Review
  13. Deep profiling of multitube flow cytometry data.Bioinformatics (Oxford, England) · 2015
    Article
  14. ISAC's classification results file format.Cytometry. Part A : the journal of the International Society for Analytical Cytology · 2015
    Article
  15. Article
  16. How to build a time-gated luminescence microscope.Current protocols in cytometry · 2014
    Article
  17. Article
  18. Review
  19. Article
  20. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

J Paul RobinsonPurdue University Cytometry Laboratories, Purdue University, West Lafayette, IN 47907, USA. jpr@flowcyt.cyto.purdue.edu
Bartek Rajwa
Valery Patsekin
Vincent Jo Davisson

Funding

Transgenic Mouse Core Facility Shared Resource (TMCF-SR)P30CA023168 · NCI · PURDUE UNIVERSITY WEST LAFAYETTE · PI Andrea L Kasinski · 1985 to 2026
$43.4M
A distributed clinical & biodefense national network for rapid organism identificR56AI089511 · NIAID · PURDUE UNIVERSITY · PI BHUNIA, ARUN K, ROBINSON, JOSEPH PAUL · 2010 to 2010
$1.3M
Specific Detection of Cervical Cancers Using Cytometry-Based Molecular DiagnosticR33CA140084 · NCI · PURDUE UNIVERSITY · PI DAVISSON, VINCENT JO, ROBINSON, JOSEPH PAUL · 2010 to 2012
$1.3M
NCI NIH HHS 1R33CA140084NCI NIH HHS P30 CA023168NCI NIH HHS R33 CA140084NIAID NIH HHS 1R56AI089511NIAID NIH HHS R56 AI089511
6 · The paper itself

Abstract

introductionFlow cytometry has been around for over 40 years, but only recently has the opportunity arisen to move into the high-throughput domain. The technology is now available and is highly competitive with imaging tools under the right conditions. Flow cytometry has, however, been a technology that has focused on its unique ability to study single cells and appropriate analytical tools are readily available to handle this traditional role of the technology. AREAS COVERED: Expansion of flow cytometry to a high-throughput (HT) and high-content technology requires both advances in hardware and analytical tools. The historical perspective of flow cytometry operation as well as how the field has changed and what the key changes have been discussed. The authors provide a background and compelling arguments for moving toward HT flow, where there are many innovative opportunities. With alternative approaches now available for flow cytometry, there will be a considerable number of new applications. These opportunities show strong capability for drug screening and functional studies with cells in suspension. EXPERT OPINION: There is no doubt that HT flow is a rich technology awaiting acceptance by the pharmaceutical community. It can provide a powerful phenotypic analytical toolset that has the capacity to change many current approaches to HT screening. The previous restrictions on the technology, based on its reduced capacity for sample throughput, are no longer a major issue. Overcoming this barrier has transformed a mature technology into one that can focus on systems biology questions not previously considered possible.

Indexed as

Data Interpretation, StatisticalDrug Evaluation, PreclinicalFlow CytometryHigh-Throughput Screening AssaysHumansPharmaceutical PreparationsPharmaceutical Preparations

Identifiers

PMID22708834
PMCPMC4389283

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.