Evidence map›Paper›PMID 22707983›Full record

ArticleAnalytical methods : advancing methods and applications2012

Application of an integrated LC-UV-MS-NMR platform to the identification of secondary metabolites from cell cultures: benzophenanthridine alkaloids from elicited Eschscholzia californica (california poppy) cell cultures().

Rose M Gathungu, John T Oldham, Susan S Bird, Carolyn W T Lee-Parsons, Paul Vouros, Roger Kautz

Abstract read
In one paragraph

Article in Analytical methods : advancing methods and applications, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 24 citations in OpenAlex.

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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 2 institutions in 1 country.

Rose M GathunguBarnett Institute of Chemical and Biological Analysis and Department of Chemistry and Chemical Biology, Northeastern University, Boston, MA 02115, USA; ; Tel: +1-617-373-8211.
John T Oldham
Susan S Bird
Carolyn W T Lee-Parsons
Paul Vouros
Roger Kautz
Northeastern University · USBrigham and Women's Hospital · US

Funding

Project 3:Isolation Chemistry of Filamentous Fungi and Biological EvaluationP01CA125066 · NCI · OHIO STATE UNIVERSITY · PI Joanna E Burdette · 2007 to 2026
$27.2M
LC-MS Analysis of DNA Adducts of Aromatic Amines: Relationship to Bladder CancerR01CA069390 · NCI · NORTHEASTERN UNIVERSITY · PI VOUROS, PAUL · 1996 to 2013
$2.7M
700 MHz Microcoil NMR Probe with Microplate AutomationS10RR025584 · NCRR · NORTHEASTERN UNIVERSITY · PI KAUTZ, ROGER A · 2009 to 2009
$199k
NCI NIH HHS P01 CA125066NCI NIH HHS R01 CA069390NCRR NIH HHS S10 RR025584
6 · The paper itself

Abstract

Plant cell and tissue cultures are a scalable and controllable alternative to whole plants for obtaining natural products of medical relevance. Cultures can be optimized for high yields of desired metabolites using rapid profiling assays such as HPLC. We describe an approach to establishing a rapid assay for profiling cell culture expression systems using a novel microscale LC-UV-MS-NMR platform, designed to acquire both MS and NMR each at their optimal sensitivity, by using nanosplitter MS from 4 mm analytical HPLC columns, and offline microdroplet NMR. The approach is demonstrated in the analysis of elicited Eschscholzia californica cell cultures induced with purified yeast extract to produce benzophenanthridine alkaloids. Preliminary HPLC-UV provides an overview of the changes in the production of alkaloids with time after elicitation. At the time point corresponding to the production of the most alkaloids, the integrated LC-MS-microcoil NMR platform is used for structural identification of extracted alkaloids. Eight benzophenanthridine alkaloids were identified at the sub-microgram level. This paper demonstrates the utility of the nanosplitter LC-MS/microdroplet NMR platform when establishing cell culture expression systems.

Identifiers

PMID22707983
PMCPMC3375730
OpenAlexW2126613529

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.