Evidence map›Paper›PMID 22701677›Full record

ArticlePloS one2012

VirF-independent regulation of Shigella virB transcription is mediated by the small RNA RyhB.

William H Broach, Nicholas Egan, Helen J Wing, Shelley M Payne, Erin R Murphy

Open access · goldAbstract read
In one paragraph

Article in PloS one, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 20 papers.

0numbers the graph read from it
0cells of the map it votes in
20citing papers in PubMed
1.8field-weighted citation impact, top 17% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

20 citing papers in PubMed, 40 citations in OpenAlex.

  1. Linking Virulence and Iron Limitation Response inJournal of proteome research · 2025
    Article
  2. A Tale aboutMicroorganisms · 2023
    Review
  3. Review
  4. Article
  5. TheFrontiers in molecular biosciences · 2022
    Review
  6. Article
  7. Impacts of Small RNAs and Their Chaperones on Bacterial Pathogenicity.Frontiers in cellular and infection microbiology · 2021
    Review
  8. Article
  9. Article
  10. Article
  11. Review
  12. Review
  13. Article
  14. Article
  15. Article
  16. Riboregulators: Fine-Tuning Virulence in Shigella.Frontiers in cellular and infection microbiology · 2016
    Review
  17. Article
  18. Article
  19. Article
  20. Iron-responsive bacterial small RNAs: variations on a theme.Metallomics : integrated biometal science · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors at 3 institutions in 1 country.

William H BroachDepartment of Biological Sciences, Molecular and Cellular Biology Program, Ohio University, Athens, Ohio, United States of America.
Nicholas Egan
Helen J Wing
Shelley M Payne
Erin R Murphy
Ohio University · USUniversity of Nevada, Las Vegas · USThe University of Texas at Austin · US

Funding

UNDERGRADUATE RESEARCH AND TRAININGP20RR016464 · NCRR · UNIVERSITY OF NEVADA RENO · PI SCHLAUCH, KAREN · 2001 to 2011
$30.3M
ROLE OF CARBON METABOLISM AND VIRULENCE OF SHIGELLA FLEXNERIR37AI016935 · NIAID · UNIVERSITY OF TEXAS AUSTIN · PI Shelley M. Payne · 2003 to 2026
$6.0M
Role of carbon metabolism in virulence of Shigella flexneriR01AI016935 · NIAID · UNIVERSITY OF TEXAS AUSTIN · PI PAYNE, SHELLEY M. · 1985 to 2017
$2.6M
Analysis of a Shigella dysenteriae Fe regulated promoterF32GM069312 · NIGMS · UNIVERSITY OF TEXAS AUSTIN · PI MURPHY, ERIN R · 2003 to 2005
$139k
NCRR NIH HHS 5P20RR016464-10NCRR NIH HHS P20 RR016464NIAID NIH HHS AI-16935NIAID NIH HHS R01 AI016935NIAID NIH HHS R37 AI016935NIGMS NIH HHS F32 GM069312PHS HHS 8-FGM069312A
6 · The paper itself

Abstract

Infection of the human host by Shigella species requires the coordinated production of specific Shigella virulence factors, a process mediated largely by the VirF/VirB regulatory cascade. VirF promotes the transcription of virB, a gene encoding the transcriptional activator of several virulence-associated genes. This study reveals that transcription of virB is also regulated by the small RNA RyhB, and importantly, that this regulation is not achieved indirectly via modulation of VirF activity. These data are the first to demonstrate that the regulation of virB transcription can be uncoupled from the master regulator VirF. It is also established that efficient RyhB-dependent regulation of transcription is facilitated by specific nucleic acid sequences within virB. This study not only reveals RyhB-dependent regulation of virB transcription as a novel point of control in the central regulatory circuit modulating Shigella virulence, but also highlights the versatility of RyhB in controlling bacterial gene expression.

Indexed as

beta-GalactosidaseBlotting, NorthernDNA PrimersGene Expression Regulation, BacterialGenes, BacterialMutagenesis, Site-DirectedReal-Time Polymerase Chain ReactionShigellaTrans-ActivatorsVirulenceVirulence Factorsbeta-GalactosidaseDNA PrimersTrans-ActivatorsVirulence Factors

Identifiers

PMID22701677
PMCPMC3372517
OpenAlexW1978590465

What OpenQuestion holds

Textmetadata
LicenceCC BY
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.