Evidence map›Paper›PMID 22700980›Full record

ArticleThe Journal of biological chemistry2012

Antiparallel dimers of the small multidrug resistance protein EmrE are more stable than parallel dimers.

Pilar Lloris-Garcerá, Frans Bianchi, Joanna S G Slusky, Susanna Seppälä, Daniel O Daley, Gunnar von Heijne

Open access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 21 papers.

0numbers the graph read from it
0cells of the map it votes in
21citing papers in PubMed
2.9field-weighted citation impact, top 8% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

21 citing papers in PubMed, 51 citations in OpenAlex.

  1. Article
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  7. Cooperativity and Steep Voltage Dependence in a Bacterial Channel.International journal of molecular sciences · 2019
    Article
  8. Structure of theProceedings of the National Academy of Sciences of the United States of America · 2018
    Article
  9. Influence of quaternary cation compound on the size of theBiochemistry and biophysics reports · 2018
    Article
  10. Article
  11. Stable membrane orientations of small dual-topology membrane proteins.Proceedings of the National Academy of Sciences of the United States of America · 2017
    Article
  12. Article
  13. Complete topology inversion can be part of normal membrane protein biogenesis.Protein science : a publication of the Protein Society · 2017
    Article
  14. Review
  15. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 1 institution in 1 country.

Pilar Lloris-GarceráCenter for Biomembrane Research, Department of Biochemistry and Biophysics, Stockholm University SE-106 91 Stockholm, Sweden.
Frans Bianchi
Joanna S G Slusky
Susanna Seppälä
Daniel O Daley
Gunnar von Heijne
Stockholm University · SE

Funding

European Research Council 232648
6 · The paper itself

Abstract

The bacterial multidrug transporter EmrE is a dual-topology membrane protein and as such is able to insert into the membrane in two opposite orientations. The functional form of EmrE is a homodimer; however, the relative orientation of the subunits in the dimer is under debate. Using EmrE variants with fixed, opposite orientations in the membrane, we now show that, although the proteins are able to form parallel dimers, an antiparallel organization of the subunits in the dimer is preferred. Blue-native PAGE analyses of intact oligomers and disulfide cross-linking demonstrate that in membranes, the proteins form parallel dimers only if no oppositely orientated partner is present. Co-expression of oppositely orientated proteins almost exclusively yields antiparallel dimers. Finally, parallel dimers can be disrupted and converted into antiparallel dimers by heating of detergent-solubilized protein. Importantly, in vivo function is correlated clearly to the presence of antiparallel dimers. Our results suggest that an antiparallel arrangement of the subunits in the dimer is more stable than a parallel organization and likely corresponds to the functional form of the protein.

Indexed as

AntiportersCystineEscherichia coliEscherichia coli ProteinsProtein BindingProtein MultimerizationProtein StabilityProtein Structure, QuaternaryProtein Structure, TertiaryAntiportersCystineEmrE protein, E coliEscherichia coli Proteins

Identifiers

PMID22700980
PMCPMC3406688
OpenAlexW2088338179

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.