Evidence map›Paper›PMID 22700962›Full record

ArticleThe Journal of biological chemistry2012

Role of the iron axial ligands of heme carrier HasA in heme uptake and release.

Célia Caillet-Saguy, Mario Piccioli, Paola Turano, Gudrun Lukat-Rodgers, Nicolas Wolff, Kenton R Rodgers, Nadia Izadi-Pruneyre, Muriel Delepierre, Anne Lecroisey

Erratum issuedOpen access · hybridAbstract read
In one paragraph

Article in The Journal of biological chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. An erratum has been issued. Cited by 17 papers.

0numbers the graph read from it
0cells of the map it votes in
17citing papers in PubMed
1.7field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

17 citing papers in PubMed, 34 citations in OpenAlex.

  1. Review
  2. Article
  3. Contributions of the heme coordinating ligands of theThe Journal of biological chemistry · 2020
    Article
  4. Article
  5. Post-transcriptional regulation of theThe Journal of biological chemistry · 2019
    Article
  6. Review
  7. Corynebacterium diphtheriae HmuT: dissecting the roles of conserved residues in heme pocket stabilization.Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2016
    Article
  8. Article
  9. Article
  10. Article
  11. Article
  12. Article
  13. NMR investigations of nitrophorin 2 belt side chain effects on heme orientation and seating of native N-terminus NP2 and NP2(D1A).Journal of biological inorganic chemistry : JBIC : a publication of the Society of Biological Inorganic Chemistry · 2014
    Article
  14. Article
  15. Heme uptake in bacterial pathogens.Current opinion in chemical biology · 2014
    Review
  16. Article
  17. Article
4 · The record

Corrections and comments

  • Erratum issued
5 · Who and what money

Authors and funding

9 authors at 5 institutions in 3 countries.

Célia Caillet-SaguyUnité de RMN des Biomolecules (CNRS URA 2185), Institut Pasteur, 28 Rue du Docteur Roux, 75015 Paris, France. ccaillet@pasteur.fr
Mario Piccioli
Paola Turano
Gudrun Lukat-Rodgers
Nicolas Wolff
Kenton R Rodgers
Nadia Izadi-Pruneyre
Muriel Delepierre
Anne Lecroisey
Centre National de la Recherche Scientifique · FRInstitut Pasteur · FRNorth Dakota State University · USInteruniversity Consortium for Magnetic Resonance · ITUniversity of Florence · IT

Funding

Study of heme uptake and transport proteins from P. aerugenosa and S. dysenteriaeR15AI072719 · NIAID · NORTH DAKOTA STATE UNIVERSITY · PI RODGERS, KENTON · 2007 to 2011
$707k
Determining the structural basis for the mechanism of catalytic O2 evolution by tR15GM094039 · NIGMS · NORTH DAKOTA STATE UNIVERSITY · PI LUKAT-RODGERS, GUDRUN SUSANNE · 2010 to 2010
$431k
NIAID NIH HHS AI072719NIAID NIH HHS R15 AI072719NIGMS NIH HHS GM094039NIGMS NIH HHS R15 GM094039
6 · The paper itself

Abstract

The hemophore protein HasA from Serratia marcescens cycles between two states as follows: the heme-bound holoprotein, which functions as a carrier of the metal cofactor toward the membrane receptor HasR, and the heme-free apoprotein fishing for new porphyrin to be taken up after the heme has been delivered to HasR. Holo- and apo-forms differ for the conformation of the two loops L1 and L2, which provide the axial ligands of the iron through His(32) and Tyr(75), respectively. In the apo-form, loop L1 protrudes toward the solvent far away from loop L2; in the holoprotein, closing of the loops on the heme occurs upon establishment of the two axial coordination bonds. We have established that the two variants obtained via single point mutations of either axial ligand (namely H32A and Y75A) are both in the closed conformation. The presence of the heme and one out of two axial ligands is sufficient to establish a link between L1 and L2, thanks to the presence of coordinating solvent molecules. The latter are stabilized in the iron coordination environment by H-bond interactions with surrounding protein residues. The presence of such a water molecule in both variants is revealed here through a set of different spectroscopic techniques. Previous studies had shown that heme release and uptake processes occur via intermediate states characterized by a Tyr(75)-iron-bound form with open conformation of loop L1. Here, we demonstrate that these states do not naturally occur in the free protein but can only be driven by the interaction with the partner proteins.

Indexed as

Bacterial ProteinsCarrier ProteinsElectron Spin Resonance SpectroscopyHemeIronLigandsMembrane ProteinsModels, MolecularMutagenesis, Site-DirectedNuclear Magnetic Resonance, BiomolecularProtein FoldingSerratia marcescensSpectrum Analysis, RamanBacterial ProteinsCarrier ProteinsHasA protein, Serratia marcescensHemeIronLigandsMembrane Proteins

Identifiers

PMID22700962
PMCPMC3411029
OpenAlexW2050683245

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.