Evidence map›Paper›PMID 22698912›Full record

ArticleDiabetes2012

Impact of common variation in bone-related genes on type 2 diabetes and related traits.

Liana K Billings, Yi-Hsiang Hsu, Rachel J Ackerman, Josée Dupuis, Benjamin F Voight, Laura J Rasmussen-Torvik, Serge Hercberg, Mark Lathrop, Daniel Barnes, Claudia Langenberg and 35 more

Open access · greenAbstract read
In one paragraph

Article in Diabetes, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers, 1 of them a synthesis that pooled it.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed, 1 pooled it
1.7field-weighted citation impact, top 15% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed, 1 synthesis or guideline pooled it, 33 citations in OpenAlex.

  1. Pooled it
  2. Article
  3. Article
  4. Article
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. Article
  11. Article
  12. Article
  13. Article
  14. Article
  15. Review
  16. Diabetes, diabetic complications, and fracture risk.Current osteoporosis reports · 2015
    Review
  17. Article
  18. Does diabetes really cause bone disease?Journal of molecular medicine (Berlin, Germany) · 2012
    Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

45 authors at 18 institutions in 8 countries.

Liana K BillingsCenter for Human Genetic Research, Massachusetts General Hospital, Boston, Massachusetts, USA.
Yi-Hsiang Hsu
Rachel J Ackerman
Josée Dupuis
Benjamin F Voight
Laura J Rasmussen-Torvik
Serge Hercberg
Mark Lathrop
Daniel Barnes
Claudia Langenberg
Jennie Hui
Mao Fu
Nabila Bouatia-Naji
Cecile Lecoeur
Ping An
Patrik K Magnusson
Ida Surakka
Samuli Ripatti
Lene Christiansen
Christine Dalgård
Lasse Folkersen
Elin Grundberg
MAGIC Investigators
DIAGRAM + Consortium
MuTHER Consortium
ASCOT Investigators
GEFOS Consortium
Per Eriksson
Jaakko Kaprio
Kirsten Ohm Kyvik
Nancy L Pedersen
Ingrid B Borecki
Michael A Province
Beverley Balkau
Philippe Froguel
Alan R Shuldiner
Lyle J Palmer
Nick Wareham
Pierre Meneton
Toby Johnson
James S Pankow
David Karasik
James B Meigs
Douglas P Kiel
Jose C Florez
Harvard University · USKarolinska Institutet · SEUniversity of Helsinki · FIUniversity of Southern Denmark · DKBroad Institute · USInstitut Pasteur · FRAddenbrooke's Hospital · GBOntario Institute for Cancer Research · CAUniversité Paris-Sud · FRUniversity of Maryland, Baltimore · USUniversity of Minnesota · USBoston University · USInserm · FRKing's College London · GBMassachusetts General Hospital · USNorthwestern University · USQueen Mary University of London · GBThe University of Western Australia · AU

Funding

Institute for Clinical and Translational Research (UL1)UL1RR025005 · NCRR · JOHNS HOPKINS UNIVERSITY · PI FORD, DANIEL ERNEST · 2007 to 2011
$75.8M
Genome-Wide Association Analysis in Essential Hypertension (FEHGAS study)R01HL086694 · NHLBI · NEW YORK UNIVERSITY SCHOOL OF MEDICINE · PI ARAVINDA CHAKRAVARTI · 2007 to 2026
$21.2M
Zonulin Antibodies in Intestinal Permeabilitiy in IDDMM01RR016500 · NCRR · UNIVERSITY OF MARYLAND BALTIMORE · PI ONUKWUGHA, EBERECHUKWU · 2002 to 2009
$20.2M
TRAINING PROGRAM IN ENDOCRINOLOGY AND DIABETEST32DK007028 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI Karen K Miller · 1986 to 2026
$18.5M
Research BaseP30DK072488 · NIDDK · UNIVERSITY OF MARYLAND BALTIMORE · PI MITCHELL, BRAXTON D, TAYLOR, SIMEON I. · 2005 to 2019
$17.3M
RISK FACTORS FOR VERTEBRAL FRACTURE AND BONE LOSSR01AR041398 · NIAMS · RHODE ISLAND HOSPITAL (PROVIDENCE, RI) · PI KIEL, DOUGLAS P. · 1991 to 2025
$16.1M
Epidemiology of Venous Thrombosis & Pulmonary EmbolismR01HL059367 · NHLBI · UNIVERSITY OF MINNESOTA TWIN CITIES · PI TANG, WEIHONG · 1998 to 2024
$11.8M
Genome-wide Search for CVD Gene-Environment InteractionsU01HL072515 · NHLBI · UNIVERSITY OF MARYLAND BALTIMORE · PI SHULDINER, ALAN R. · 2002 to 2008
$11.2M
Multidisciplinary Clinical and Translational Science (MCTS) Program (UL1)UL1TR000150 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LLOYD-JONES, DONALD M · 2012 to 2013
$10.1M
JHU-UMD Diabetes Research CenterP30DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI AHIMA, REXFORD S. · 2013 to 2017
$9.7M
Diabetes Research and Training CenterP60DK079637 · NIDDK · JOHNS HOPKINS UNIVERSITY · PI WONDISFORD, FREDRIC E. · 2008 to 2012
$9.1M
Common Genetic Variation and Quantitative Diabetes TraitsR01DK078616 · NIDDK · MASSACHUSETTS GENERAL HOSPITAL · PI MEIGS, JAMES B · 2008 to 2014
$5.0M
Medical Research Council G0900339Medical Research Council G1002084Medical Research Council MC_U106179471NCATS NIH HHS UL1 TR000150NCRR NIH HHS 1-S10-RR-163736-01A1NCRR NIH HHS M01 RR016500NCRR NIH HHS M01-RR-16500NCRR NIH HHS UL1 RR025005NCRR NIH HHS UL1-RR-025005NHGRI NIH HHS U01 HG004402NHGRI NIH HHS U01-HG-004402NHLBI NIH HHS 5-R01-HL-08770003NHLBI NIH HHS 5-R01-HL-08821502NHLBI NIH HHS HHSN268201100005CNHLBI NIH HHS HHSN268201100005GNHLBI NIH HHS HHSN268201100005INHLBI NIH HHS HHSN268201100006CNHLBI NIH HHS HHSN268201100007CNHLBI NIH HHS HHSN268201100007INHLBI NIH HHS HHSN268201100008CNHLBI NIH HHS HHSN268201100008INHLBI NIH HHS HHSN268201100009CNHLBI NIH HHS HHSN268201100009INHLBI NIH HHS HHSN268201100010CNHLBI NIH HHS HHSN268201100011CNHLBI NIH HHS HHSN268201100011INHLBI NIH HHS HHSN268201100012CNHLBI NIH HHS N01 HC025195NHLBI NIH HHS N01-HC-25195NHLBI NIH HHS N02-HL-6-4278NHLBI NIH HHS R01 HL059367NHLBI NIH HHS R01 HL086694NHLBI NIH HHS R01-HL-086694NHLBI NIH HHS R01 HL087641NHLBI NIH HHS R01-HL-087641NHLBI NIH HHS R01-HL-59367NHLBI NIH HHS U01 HL072515NHLBI NIH HHS U01-HL-72515NIAMS NIH HHS R01 AR041398NIAMS NIH HHS R21 AR056405NIAMS NIH HHS R21-AR-056405NIA NIH HHS R01 AG018728NIA NIH HHS R01-AG-18728NIA NIH HHS R01-AR/AG-41398NIDDK NIH HHS 1-L30-DK-089944-01NIDDK NIH HHS 5-R01-DK-06833603NIDDK NIH HHS 5-R01-DK-07568102NIDDK NIH HHS K24 DK080140NIDDK NIH HHS K24-DK-080140NIDDK NIH HHS L30 DK089944NIDDK NIH HHS P30 DK072488NIDDK NIH HHS P30-DK-072488NIDDK NIH HHS P30 DK079637NIDDK NIH HHS P60 DK079637NIDDK NIH HHS P60-DK-079637NIDDK NIH HHS R01-DK-04261NIDDK NIH HHS R01 DK078616NIDDK NIH HHS R01-DK-078616NIDDK NIH HHS T32 DK007028NIDDK NIH HHS T32-DK-007028-35PHS HHS HHSN268200625226CWellcome Trust
6 · The paper itself

Abstract

Exploring genetic pleiotropy can provide clues to a mechanism underlying the observed epidemiological association between type 2 diabetes and heightened fracture risk. We examined genetic variants associated with bone mineral density (BMD) for association with type 2 diabetes and glycemic traits in large well-phenotyped and -genotyped consortia. We undertook follow-up analysis in ∼19,000 individuals and assessed gene expression. We queried single nucleotide polymorphisms (SNPs) associated with BMD at levels of genome-wide significance, variants in linkage disequilibrium (r(2) > 0.5), and BMD candidate genes. SNP rs6867040, at the ITGA1 locus, was associated with a 0.0166 mmol/L (0.004) increase in fasting glucose per C allele in the combined analysis. Genetic variants in the ITGA1 locus were associated with its expression in the liver but not in adipose tissue. ITGA1 variants appeared among the top loci associated with type 2 diabetes, fasting insulin, β-cell function by homeostasis model assessment, and 2-h post-oral glucose tolerance test glucose and insulin levels. ITGA1 has demonstrated genetic pleiotropy in prior studies, and its suggested role in liver fibrosis, insulin secretion, and bone healing lends credence to its contribution to both osteoporosis and type 2 diabetes. These findings further underscore the link between skeletal and glucose metabolism and highlight a locus to direct future investigations.

Indexed as

Adipose TissueAdultBlood GlucoseBody Mass IndexBone DensityDiabetes Mellitus, Type 2EndonucleasesFemaleFractures, BoneGenome-Wide Association StudyHumansInsulinIntegrin alpha1Linkage DisequilibriumLiverMicrofilament ProteinsBlood GlucoseEndonucleasesInsulinIntegrin alpha1Microfilament ProteinsNuclear Proteinspelo protein, human

Identifiers

PMID22698912
PMCPMC3402303
OpenAlexW2105070968

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-ND
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.