Evidence map›Paper›PMID 22698070›Full record

ArticleJournal of medicinal chemistry2012

A peptide nucleic acid-aminosugar conjugate targeting transactivation response element of HIV-1 RNA genome shows a high bioavailability in human cells and strongly inhibits tat-mediated transactivation of HIV-1 transcription.

Indrajit Das, Jérôme Désiré, Dinesh Manvar, Isabelle Baussanne, Virendra N Pandey, Jean-Luc Décout

Abstract read
In one paragraph

Article in Journal of medicinal chemistry, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 12 papers.

0numbers the graph read from it
0cells of the map it votes in
12citing papers in PubMed
1.2field-weighted citation impact, top 22% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

12 citing papers in PubMed, 36 citations in OpenAlex.

  1. Article
  2. Review
  3. Review
  4. Amphiphilic Aminoglycosides as Medicinal Agents.International journal of molecular sciences · 2020
    Review
  5. Article
  6. Article
  7. Article
  8. Article
  9. Review
  10. A simple strategy for glycosyltransferase-catalyzed aminosugar nucleotide synthesis.Chembiochem : a European journal of chemical biology · 2014
    Article
  11. Article
  12. Glycopolymer probes of signal transduction.Chemical Society reviews · 2013
    Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors at 4 institutions in 2 countries.

Indrajit DasUniversité de Grenoble I/CNRS, UMR 5063, Département de Pharmacochimie Moléculaire, ICMG FR 2607, 470 rue de la Chimie BP 53, F-38041 Grenoble, France.
Jérôme Désiré
Dinesh Manvar
Isabelle Baussanne
Virendra N Pandey
Jean-Luc Décout
Département de Chimie Moléculaire · FRUniversité Grenoble Alpes · FRRutgers New Jersey Medical SchoolRutgers, The State University of New Jersey · US

Funding

GENOME TARGETED INHIBITORS OF RETROVIRUSESR01AI042520 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI PANDEY, VIRENDRA NATH · 1999 to 2007
$2.2M
Genome Targeted Inhibitors of RetrovirusesR21AI042520 · NIAID · UNIV OF MED/DENT OF NJ-NJ MEDICAL SCHOOL · PI PANDEY, VIRENDRA NATH · 2002 to 2002
$272k
NIAID NIH HHS R01 AI042520NIAID NIH HHS R21 AI042520
6 · The paper itself

Abstract

The 6-aminoglucosamine ring of the aminoglycoside antibiotic neomycin B (ring II) was conjugated to a 16-mer peptide nucleic acid (PNA) targeting HIV-1 TAR RNA. For this purpose, we prepared the aminoglucosamine monomer 15 and attached it to the protected PNA prior to its cleavage from the solid support. We found that the resulting PNA-aminoglucosamine conjugate is stable under acidic conditions, efficiently taken up by the human cells and fairly distributed in both cytosol and nucleus without endosomal entrapment because cotreatment with endosome-disrupting agent had no effect on its cellular distribution. The conjugate displayed very high target specificity in vitro and strongly inhibited Tat mediated transactivation of HIV-1 LTR transcription in a cell culture system. The unique properties of this new class of PNA conjugate suggest it to be a potential candidate for therapeutic application.

Indexed as

AcetylglucosamineAnti-HIV AgentsAntiviral AgentsBinding SitesBiological AvailabilityCell Line, TumorCell NucleusCytosolEndosomesFluorescein-5-isothiocyanateFramycetinGenome, ViralHIV-1HIV Long Terminal RepeatHumansPeptide Nucleic AcidsAcetylglucosamineAnti-HIV AgentsAntiviral AgentsFluorescein-5-isothiocyanateFramycetinPeptide Nucleic AcidsRNA, Viraltat Gene Products, Human Immunodeficiency Virus

Identifiers

PMID22698070
PMCPMC3400927
OpenAlexW2080912896

What OpenQuestion holds

Textmetadata
LicenceTDM
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.