Evidence map›Paper›PMID 22696652›Full record

ArticleJournal of virology2012

Increased antibody affinity confers broad in vitro protection against escape mutants of severe acute respiratory syndrome coronavirus.

Mridula Rani, Meagan Bolles, Eric F Donaldson, Thomas Van Blarcom, Ralph Baric, Brent Iverson, George Georgiou

Abstract read
In one paragraph

Article in Journal of virology, 2012. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 19 papers.

0numbers the graph read from it
0cells of the map it votes in
19citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

19 citing papers in PubMed.

  1. Article
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  6. Review
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  11. Reconstitution of the receptor-binding motif of the SARS coronavirus.Protein engineering, design & selection : PEDS · 2015
    Article
  12. Article
  13. Article
  14. Article
  15. Identification of human neutralizing antibodies against MERS-CoV and their role in virus adaptive evolution.Proceedings of the National Academy of Sciences of the United States of America · 2014
    Article
  16. Severe acute respiratory syndrome: a vanished evil?Journal of thoracic disease · 2013
    Article
  17. Review
  18. Article
  19. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Mridula RaniInstitute of Cellular and Molecular Biology, The University of Texas at Austin, Austin, Texas, USA.
Meagan Bolles
Eric F Donaldson
Thomas Van Blarcom
Ralph Baric
Brent Iverson
George Georgiou

Funding

MEDICAL SCIENTIST TRAINING PROGRAMT32GM008719 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI DARVILLE, TONI, DESHMUKH, MOHANISH P · 1999 to 2023
$15.1M
Broad Spectrum Neutralizing Human Abs to SARS and Related CoronavirusesR01AI085524 · NIAID · DANA-FARBER CANCER INST · PI MARASCO, WAYNE A. · 2010 to 2014
$5.4M
Novel Molecular Recognition Reagents for Detection of Pathogenic BurkholderiaU01AI078008 · NIAID · UNIVERSITY OF TEXAS AT AUSTIN · PI BROWN, KATHERINE ANNE · 2008 to 2010
$1.8M
NIAID NIH HHS 1 U01AI078008NIAID NIH HHS R0 1AI085524NIAID NIH HHS U01 AI078008NIGMS NIH HHS T32 GM008719NIGMS NIH HHS T32GM008719
6 · The paper itself

Abstract

Even though the effect of antibody affinity on neutralization potency is well documented, surprisingly, its impact on neutralization breadth and escape has not been systematically determined. Here, random mutagenesis and DNA shuffling of the single-chain variable fragment of the neutralizing antibody 80R followed by bacterial display screening using anchored periplasmic expression (APEx) were used to generate a number of higher-affinity variants of the severe acute respiratory syndrome coronavirus (SARS-CoV)-neutralizing antibody 80R with equilibrium dissociation constants (K(D)) as low as 37 pM, a >270-fold improvement relative to that of the parental 80R single-chain variable fragment (scFv). As expected, antigen affinity was shown to correlate directly with neutralization potency toward the icUrbani strain of SARS-CoV. Additionally, the highest-affinity antibody fragment displayed 10-fold-increased broad neutralization in vitro and completely protected against several SARS-CoV strains containing substitutions associated with antibody escape. Importantly, higher affinity also led to the suppression of viral escape mutants in vitro. Escape from the highest-affinity variant required reduced selective pressure and multiple substitutions in the binding epitope. Collectively, these results support the hypothesis that engineered antibodies with picomolar dissociation constants for a neutralizing epitope can confer escape-resistant protection.

Indexed as

Amino Acid SequenceAnimalsAntibodies, NeutralizingAntibodies, ViralAntibody AffinityCell LineHumansKineticsMolecular Sequence DataMutationNeutralization TestsSequence AlignmentSevere Acute Respiratory SyndromeSevere acute respiratory syndrome-related coronavirusSingle-Chain AntibodiesAntibodies, NeutralizingAntibodies, ViralSingle-Chain Antibodies

Identifiers

PMID22696652
PMCPMC3416138

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.